RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 EFCAB11Q9BUY7 163 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 CAPS2Q9BXY5 557 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 NUAK2Q9H093 628 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 HHATLQ9HCP6 504 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 SEPSECSQ9HD40 501 aaKnown RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 FBXO6Q9NRD1 293 aaPredicted RBP4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 GRHPRQ9UBQ7 328 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 LCMT1Q9UIC8 334 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC9A8Q9Y2E8 581 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 HYOU1Q9Y4L1 999 aa4.13□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC22A23A1A5C7 686 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 ZSCAN5BA6NJL1 495 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 RPL36A-HNRNPH2H7BZ11 118 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 SPRY3O43610 288 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 ENSAO43768 121 aaKnown RBP4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 UPK3AO75631 287 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 FSTL3O95633 263 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 TACR3P29371 465 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 GRK5P34947 590 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 MAP3K8P41279 467 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 PCP4P48539 62 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 HNMTP50135 292 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF81P51508 661 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 CSNK2A1P68400 391 aaPredicted RBP4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 RAE1P78406 368 aaKnown RBP4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 ARF1P84077 181 aaKnown RBP4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF117Q03924 483 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 TBX2Q13207 712 aaPredicted RBP4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 LY6EQ16553 131 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 GKAP1Q5VSY0 366 aaPredicted RBP4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 PRAMEF8Q5VWM4 474 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 PRAMEF7Q5VXH5 474 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 METAP1DQ6UB28 335 aaPredicted RBP4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 CYP20A1Q6UW02 462 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF584Q8IVC4 421 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 PAQR4Q8N4S7 273 aaPredicted RBP4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 OTUD6BQ8N6M0 293 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 HUS1BQ8NHY5 278 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC7A13Q8TCU3 470 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 C17orf50Q8WW18 174 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 LRRC39Q96DD0 335 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 SSX3Q99909 188 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 TMEM246Q9BRR3 403 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 CNOT10Q9H9A5 744 aaKnown RBP4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 RAB18Q9NP72 206 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF224Q9NZL3 707 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 SELENONQ9NZV5 590 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 KIAA1456Q9P272 454 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 MIOXQ9UGB7 285 aa4.12□□□□□ -1.75
SBDSP1-204ENST00000453858 TNXBP22105 4242 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 HMX3A6NHT5 357 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 TRIM64CA6NLI5 447 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF587BE7ETH6 402 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 TMEM178BH3BS89 294 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 PHYHO14832 338 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 FCN3O75636 299 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 PMS2P2O95744 297 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 HLA-HP01893 362 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 IFNA6P05013 189 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 RPS2P15880 293 aaKnown RBP4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 MYCNOSP40205 109 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 PSMB10P40306 273 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 PITPNBP48739 271 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 SH3BGRP55822 239 aaPredicted RBP4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 ERVS71-1P61550 626 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 BLCAPP62952 87 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 CUL3Q13618 768 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 AANATQ16613 207 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 HAGHQ16775 308 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 TRMT5Q32P41 509 aaKnown RBP4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 ARHGAP11BQ3KRB8 267 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 RNLSQ5VYX0 342 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 LIN54Q6MZP7 749 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 CEMP1Q6PRD7 247 aaPredicted RBP4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 C10orf99Q6UWK7 81 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 C16orf89Q6UX73 402 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 C18orf65Q6ZTR6 163 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 PIWIL3Q7Z3Z3 882 aaKnown RBP4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 ABHD12BQ7Z5M8 362 aaPredicted RBP4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 CCDC36Q8IYA8 594 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 KATNAL2Q8IYT4 538 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 OR9A2Q8NGT5 310 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 ZNF519Q8TB69 540 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 PLEKHA8Q96JA3 519 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 SERPINB12Q96P63 405 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 GPR78Q96P69 363 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 ELOVL1Q9BW60 279 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 EGLN1Q9GZT9 426 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 IL22Q9GZX6 179 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 ARL8BQ9NVJ2 186 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 TAS2R9Q9NYW1 312 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC12A4Q9UP95 1085 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 RCE1Q9Y256 329 aa4.11□□□□□ -1.75
SBDSP1-204ENST00000453858 A0A1W2PQD3 144 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 SAC3D1A6NKF1 404 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 EPM2AB3EWF7 344 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 NPFFO15130 113 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 SLC22A3O75751 556 aa4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 SNRNP70P08621 437 aaKnown RBP4.1□□□□□ -1.75
SBDSP1-204ENST00000453858 IGHV4-30-4P0DP06 118 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms