RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 NKAIN3Q8N8D7 197 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 GATSQ8NAP1 163 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 MLKLQ8NB16 471 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 OR1K1Q8NGR3 316 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 CDC26Q8NHZ8 85 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 ACTL9Q8TC94 416 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 ZFP90Q8TF47 636 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 EEF1AKMT1Q8WVE0 214 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 RORBQ92753 470 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 BCL2L2Q92843 193 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-205ENST00000447267 ELMOD3Q96FG2 381 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 SH3YL1Q96HL8 342 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-205ENST00000447267 COG8Q96MW5 612 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF570Q96NI8 536 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 DUX3Q96PT4 197 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 RBBP8Q99708 897 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 HEMGNQ9BXL5 484 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF717Q9BY31 904 aaPredicted RBP3.92□□□□□ -1.78
SDCBP-205ENST00000447267 C12orf10Q9HB07 376 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 SCPEP1Q9HB40 452 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 VCX3AQ9NNX9 186 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 FARSBQ9NSD9 589 aaKnown RBP3.92□□□□□ -1.78
SDCBP-205ENST00000447267 MS4A12Q9NXJ0 267 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 MAT2BQ9NZL9 334 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 UVRAGQ9P2Y5 699 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 PHF11Q9UIL8 331 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 FAM32AQ9Y421 112 aaKnown RBP3.92□□□□□ -1.78
SDCBP-205ENST00000447267 HYOU1Q9Y4L1 999 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 ASB4Q9Y574 426 aa3.92□□□□□ -1.78
SDCBP-205ENST00000447267 IGKV3D-15A0A087WSY6 115 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 A0A087WZY1 265 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 A0A087X0T9 212 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 A0A0A6YYD5 115 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 AQP7P3A6NL99 342 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF716A6NP11 495 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 SPRY3O43610 288 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 IDH3BO43837 385 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 VAPBO95292 243 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 OXSR1O95747 527 aaPredicted RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 IGKV3-15P01624 115 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 SNRNP70P08621 437 aaKnown RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 FBP1P09467 338 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 FAM228BP0C875 321 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 OR8G3PP0DMU2 310 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 PORP16435 677 aaPredicted RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF3P17036 446 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 CTRB1P17538 263 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 OGNP20774 298 aaKnown RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 GLRXP35754 106 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 CBX5P45973 191 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 XKP51811 444 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 AP1S2P56377 157 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 EIF3EP60228 445 aaKnown RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 IL5RAQ01344 420 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 GALK2Q01415 458 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 MFGE8Q08431 387 aaPredicted RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 C17orf67Q0P5P2 114 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 LRRC74AQ0VAA2 488 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 TRAP1Q12931 704 aaKnown RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 FOXF1Q12946 379 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 SPCS2Q15005 226 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 MAPRE2Q15555 327 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 LTB4RQ15722 352 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 NDUFA5Q16718 116 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 PCGF3Q3KNV8 242 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 MMEL1Q495T6 779 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 ATP6AP1LQ52LC2 224 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 PLA1AQ53H76 456 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 HSP90AA5PQ58FG0 334 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 CTRB2Q6GPI1 263 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 MRNIPQ6NTE8 343 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 PIWIL3Q7Z3Z3 882 aaKnown RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 LINC00523Q86TU6 105 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 ZCCHC7Q8N3Z6 543 aaKnown RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 PNKDQ8N490 385 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 C11orf42Q8N5U0 333 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 NANOGP1Q8N7R0 232 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 SRFBP1Q8NEF9 429 aaKnown RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 OR8H1Q8NGG4 311 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 OR5R1Q8NH85 324 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 WDR20Q8TBZ3 569 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 MGARPQ8TDB4 240 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 ZNF473Q8WTR7 871 aaKnown RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 GEMIN6Q8WXD5 167 aaKnown RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 ATP6V1E2Q96A05 226 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 MED30Q96HR3 178 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 VSTM2LQ96N03 204 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 PITX2Q99697 317 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 CIB1Q99828 191 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 SIKE1Q9BRV8 207 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 NMUR2Q9GZQ4 415 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 RANBP3Q9H6Z4 567 aaPredicted RBP3.91□□□□□ -1.78
SDCBP-205ENST00000447267 OBP2BQ9NPH6 170 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 TMEM45AQ9NWC5 275 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 NKIRAS2Q9NYR9 191 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 EMC3Q9P0I2 261 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 KIF17Q9P2E2 1029 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 DNAJB11Q9UBS4 358 aa3.91□□□□□ -1.78
SDCBP-205ENST00000447267 LRCH1Q9Y2L9 728 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms