RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 ZNF133P52736 654 aaPredicted RBP18■□□□□ 0.47
VSX1-206ENST00000444511 ERVS71-1P61550 626 aa18■□□□□ 0.47
VSX1-206ENST00000444511 MRPS34P82930 218 aaKnown RBP18■□□□□ 0.47
VSX1-206ENST00000444511 CD47Q08722 323 aa18■□□□□ 0.47
VSX1-206ENST00000444511 LAPTM4AQ15012 233 aa18■□□□□ 0.47
VSX1-206ENST00000444511 ARMC4Q5T2S8 1044 aa18■□□□□ 0.47
VSX1-206ENST00000444511 RINLQ6ZS11 566 aa18■□□□□ 0.47
VSX1-206ENST00000444511 RFLNBQ8N5W9 214 aa18■□□□□ 0.47
VSX1-206ENST00000444511 TPD52L3Q96J77 140 aa18■□□□□ 0.47
VSX1-206ENST00000444511 TSPAN32Q96QS1 320 aa18■□□□□ 0.47
VSX1-206ENST00000444511 SMURF2Q9HAU4 748 aa18■□□□□ 0.47
VSX1-206ENST00000444511 FGFR1OP2Q9NVK5 253 aa18■□□□□ 0.47
VSX1-206ENST00000444511 IGLV3-9A0A075B6K5 115 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 NPIPB13A6NJU9 1138 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 FAM220BPB1ANY3 271 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 NPIPB4C9JG80 1138 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 TCF21O43680 179 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 SASH3O75995 380 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 TFP02787 698 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 TSPAN19P0C672 248 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 NR2C1P13056 603 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 DRD4P21917 467 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 CCNOP22674 350 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 CDAP32320 146 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 CCL8P80075 99 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 ST3GAL3Q11203 375 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 TOP3AQ13472 1001 aaPredicted RBP17.99■□□□□ 0.47
VSX1-206ENST00000444511 PCGF3Q3KNV8 242 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 ALG10Q5BKT4 473 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 PABPC1L2AQ5JQF8 200 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 OR2T12Q8NG77 320 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 NSMAFQ92636 917 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 HDAC2Q92769 488 aaKnown RBP17.99■□□□□ 0.47
VSX1-206ENST00000444511 RACGAP1Q9H0H5 632 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 TXNIPQ9H3M7 391 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 LPAR2Q9HBW0 351 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 TREM2Q9NZC2 230 aa17.99■□□□□ 0.47
VSX1-206ENST00000444511 GMNCA6NCL1 334 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 PIP5K1CO60331 668 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 CDC14BO60729 498 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 RP2O75695 350 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 MT-ND5P03915 603 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 FMODQ06828 376 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 SGCAQ16586 387 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 MOGQ16653 247 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 OR1J1Q8NGS3 322 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 HIF3AQ9Y2N7 669 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 UGT2A1Q9Y4X1 527 aa17.98■□□□□ 0.47
VSX1-206ENST00000444511 FAM157AC9JC47 383 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 WNT9BO14905 357 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 TPD52L2O43399 206 aaKnown RBP17.97■□□□□ 0.47
VSX1-206ENST00000444511 MSMBP08118 114 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 IFI30P13284 250 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 ZNF32P17041 273 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 STOMP27105 288 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 TAF11Q15544 211 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 MICU2Q8IYU8 434 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 CPEB3Q8NE35 698 aaKnown RBP17.97■□□□□ 0.47
VSX1-206ENST00000444511 LZICQ8WZA0 190 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 NABP1Q96AH0 204 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 TMEM186Q96B77 213 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 NMD3Q96D46 503 aaKnown RBP17.97■□□□□ 0.47
VSX1-206ENST00000444511 BPIFA2Q96DR5 249 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 PRRC1Q96M27 445 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 HIF1ANQ9NWT6 349 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 NKIRAS2Q9NYR9 191 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 EIF3KQ9UBQ5 218 aaKnown RBP17.97■□□□□ 0.47
VSX1-206ENST00000444511 GRIP1Q9Y3R0 1128 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 CAPN7Q9Y6W3 813 aa17.97■□□□□ 0.47
VSX1-206ENST00000444511 IGKV1D-43A0A0B4J1Z2 117 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 ELOVL7A1L3X0 281 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 HTR3EA5X5Y0 456 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 GAAP10253 952 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 SELENOWP63302 87 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 TEKQ02763 1124 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 GLO1Q04760 184 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 CGB2Q6NT52 195 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 UNQ6126/PRO20091Q6UXV3 157 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 OR51F2Q8NH61 342 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 RBP7Q96R05 134 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 ALG12Q9BV10 488 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 DECR2Q9NUI1 292 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 METRNQ9UJH8 293 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 A4GNTQ9UNA3 340 aa17.96■□□□□ 0.47
VSX1-206ENST00000444511 C5orf49A4QMS7 147 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 IGHV3-13P01766 116 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 GCH1P30793 250 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 CRYBB2P43320 205 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 GDI2P50395 445 aaKnown RBP17.95■□□□□ 0.46
VSX1-206ENST00000444511 RPL27P61353 136 aaKnown RBP17.95■□□□□ 0.46
VSX1-206ENST00000444511 ERVK-25P63136 954 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 THEM4Q5T1C6 240 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 SLC25A47Q6Q0C1 308 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 AKR7LQ8NHP1 331 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 FNDC8Q8TC99 324 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 POM121L2Q96KW2 1035 aa17.95■□□□□ 0.46
VSX1-206ENST00000444511 IGHV1-69-2A0A0G2JMI3 117 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 IFNW1P05000 195 aa17.94■□□□□ 0.46
VSX1-206ENST00000444511 GUCA1AP43080 201 aaPredicted RBP17.94■□□□□ 0.46
VSX1-206ENST00000444511 YAP1P46937 504 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms