RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 GPR4P46093 362 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 ARRB1P49407 418 aaPredicted RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 TAS2R38P59533 333 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 PPP2CBP62714 309 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 PPP2CAP67775 309 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 HIST1H3AP68431 136 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 HBA1P69905 142 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 SIRPAP78324 504 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 PITX1P78337 314 aaPredicted RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 IL13RA1P78552 427 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 CDK3Q00526 305 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 LTBQ06643 244 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 SPOCK1Q08629 439 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 DHRS2Q13268 280 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 DOC2BQ14184 412 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 MLC1Q15049 377 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 ATP6V1FQ16864 119 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMEM183BQ1AE95 376 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 SLC25A35Q3KQZ1 300 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 KHDC3LQ587J8 217 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 DCAF12L2Q5VW00 463 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 OR2A2Q6IF42 318 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 PWWP2BQ6NUJ5 590 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 TNFAIP8L2Q6P589 184 aaPredicted RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 KLHL24Q6TFL4 600 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 UNQ6126/PRO20091Q6UXV3 157 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 MBOAT2Q6ZWT7 520 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 PRSS45Q7RTY3 260 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMED4Q7Z7H5 227 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 SLC25A42Q86VD7 318 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 NR2C2APQ86WQ0 139 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 THNSL2Q86YJ6 484 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 ZNF584Q8IVC4 421 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 SCN4BQ8IWT1 228 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 GABRG1Q8N1C3 465 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 CBARPQ8N350 705 aaPredicted RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 MORN4Q8NDC4 146 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMEM104Q8NE00 496 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 CCDC54Q8NEL0 328 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 OR51S1Q8NGJ8 323 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 SFXN5Q8TD22 340 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 GPR148Q8TDV2 347 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 NPRL2Q8WTW4 380 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 ROBO4Q8WZ75 1007 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 SMPDL3BQ92485 455 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 PSMG2Q969U7 264 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 ANKRD9Q96BM1 317 aaPredicted RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 TM4SF18Q96CE8 201 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 DTD2Q96FN9 168 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 MARS2Q96GW9 593 aaKnown RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMEM19Q96HH6 336 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 RCC1LQ96I51 464 aaKnown RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 FAM71F1Q96KD3 344 aaPredicted RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 C4orf36Q96KX1 117 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 WDR92Q96MX6 357 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 DMRTA2Q96SC8 542 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 ZNF587Q96SQ5 575 aaPredicted RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 CNN2Q99439 309 aaKnown RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 FAM83CQ9BQN1 747 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 URM1Q9BTM9 101 aaKnown RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 RSRP1Q9BUV0 290 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 PLK3Q9H4B4 646 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 SGK2Q9HBY8 427 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 CMC2Q9NRP2 79 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 CKLFQ9UBR5 152 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 KLK11Q9UBX7 282 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 SUSD2Q9UGT4 822 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 STEAP1Q9UHE8 339 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 IL20RAQ9UHF4 553 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 MOKQ9UQ07 419 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 YBX2Q9Y2T7 364 aaKnown RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 ZNF281Q9Y2X9 895 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 MRPS18CQ9Y3D5 142 aaKnown RBP5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 HDGFL3Q9Y3E1 203 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 CSAG2Q9Y5P2 127 aa5.12□□□□□ -1.59
VTI1BP4-201ENST00000427516 NYNRINQ9P2P1 1898 aaKnown RBP5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 PIGBOS1A0A0B4J2F0 54 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMEM272A0A1B0GTI8 110 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 A0A1W2PPE3 182 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 KLRG2A4D1S0 409 aaPredicted RBP5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 C2orf78A6NCI8 922 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 TMEM235A6NFC5 223 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 TLCD2A6NGC4 264 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 CBY3A6NI87 242 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 ANKRD66B4E2M5 251 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 AGRPO00253 132 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 DCTN6O00399 190 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 PLRG1O43660 514 aaKnown RBP5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 DKK1O94907 266 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 IFNA21P01568 189 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 AMY2AP04746 511 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 RPN2P04844 631 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 IFNA6P05013 189 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 DCNP07585 359 aaKnown RBP5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 C1SP09871 688 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 FAM157CP0CG43 387 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 ZNF865P0CJ78 1059 aaPredicted RBP5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 C6P13671 934 aa5.11□□□□□ -1.59
VTI1BP4-201ENST00000427516 EPORP19235 508 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms