RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 PPIL2Q13356 520 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 FZD2Q14332 565 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 ITIH4Q14624 930 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 SHHQ15465 462 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 SGCAQ16586 387 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 DMRTC1Q5HYR2 192 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 LIN9Q5TKA1 542 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 FAM71E1Q6IPT2 247 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 Q6ZSR3 168 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 EIF3MQ7L2H7 374 aaKnown RBP2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 H2BFWTQ7Z2G1 175 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 FAM86B1Q8N7N1 296 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR10G9Q8NGN4 311 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 GLYATL2Q8WU03 294 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 TSEN15Q8WW01 171 aaKnown RBP2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 UFD1Q92890 307 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 FGF14Q92915 247 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 EFHD2Q96C19 240 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 C19orf60Q96EN9 201 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 TSNARE1Q96NA8 513 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 FMO2Q99518 471 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 RIOK2Q9BVS4 552 aaKnown RBP2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 TEKT3Q9BXF9 490 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 C8orf33Q9H7E9 229 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 LYRM4Q9HD34 91 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 INPP5EQ9NRR6 644 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF835Q9Y2P0 537 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 N6AMT1Q9Y5N5 214 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 NPTNQ9Y639 398 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 C12orf71A8MTZ7 269 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 NDUFS8O00217 210 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 NVLO15381 856 aaKnown RBP2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 CLPXO76031 633 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 SCGNO76038 276 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 H6PDO95479 791 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 OXSR1O95747 527 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 TGM6O95932 706 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 IVLP07476 585 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 TROVE2P10155 538 aaKnown RBP eCLIP2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF43P17038 809 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 TBPP20226 339 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 RAB9AP51151 201 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 DAOAP59103 153 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 CDK16Q00536 496 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 ASPHQ12797 758 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 CHRNA6Q15825 494 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 LY6G6FQ5SQ64 297 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 SASS6Q6UVJ0 657 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 ENPP6Q6UWR7 440 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 NIPA1Q7RTP0 329 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 LUZP2Q86TE4 346 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 PCP2Q8IVA1 136 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 CCDC65Q8IXS2 484 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 PIANPQ8IYJ0 282 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 ACOT4Q8N9L9 421 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 SPERTQ8NA61 448 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR8K3Q8NH51 312 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 FAM81AQ8TBF8 368 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 ACMSDQ8TDX5 336 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 GPX8Q8TED1 209 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZFP90Q8TF47 636 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 PRRC1Q96M27 445 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 TGS1Q96RS0 853 aaKnown RBP2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 SLC39A3Q9BRY0 314 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 CENPKQ9BS16 269 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 RAB34Q9BZG1 259 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 ANKRD19PQ9H560 264 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 SYNDIG1Q9H7V2 258 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 MTCH1Q9NZJ7 389 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 PITPNC1Q9UKF7 332 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 MMP17Q9ULZ9 603 aa2.39□□□□□ -2.03
HMGB1P49-201ENST00000418882 PNPLA6Q8IY17 1366 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 IGLV11-55A0A075B6I3 123 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 TMEM150BA6NC51 233 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 C9JVG2 144 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF701M0R085 212 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 PEX7O00628 323 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 LSM1O15116 133 aaKnown RBP2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 POLR3GO15318 223 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 NMT2O60551 498 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 SPAG7O75391 227 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 MRPL3P09001 348 aaKnown RBP2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF286BP0CG31 522 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF30P17039 623 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 KITLGP21583 273 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 RDXP35241 583 aaKnown RBP2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 SLC26A3P40879 764 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 CRYBB2P43320 205 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 BCAP31P51572 246 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 C21orf59P57076 290 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 OGDHQ02218 1023 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 GNMTQ14749 295 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 SLC8B1Q6J4K2 584 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 ASCL5Q7RTU5 278 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 SCD5Q86SK9 330 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 ZNF709Q8N972 641 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR4A15Q8NGL6 344 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 MAGEE2Q8TD90 523 aaPredicted RBP2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 MCOLN3Q8TDD5 553 aa2.38□□□□□ -2.03
HMGB1P49-201ENST00000418882 DNAJC19Q96DA6 116 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms