RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	PMS2P3	Q13401	168 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	C1D	Q13901	141 aa	Known RBP	7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	GPAT3	Q53EU6	434 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CASC10	Q5T4H9	136 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	GPR157	Q5UAW9	335 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	OR4F3	Q6IEY1	312 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	BTNL3	Q6UXE8	466 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ZNF836	Q6ZNA1	936 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RFPL4B	Q6ZWI9	263 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	KRT77	Q7Z794	578 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ANKRD46	Q86W74	232 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CLIP4	Q8N3C7	705 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SPIC	Q8N5J4	248 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ZNF283	Q8N7M2	679 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PIK3C3	Q8NEB9	887 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PNPT1	Q8TCS8	783 aa	Known RBP	7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RNF141	Q8WVD5	230 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ITLN1	Q8WWA0	313 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	COQ8B	Q96D53	544 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MTERF3	Q96E29	417 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	C3orf30	Q96M34	536 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	B9D2	Q9BPU9	175 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	OR2J1	Q9GZK6	312 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ZCCHC4	Q9H5U6	513 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TCF7L2	Q9NQB0	619 aa		7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	7.12	□□□□□ -1.27
NIF3L1-206	ENST00000416651	IGKV1D-42	A0A075B6H8	117 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LOC100509620	A0A075B734	347 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LCE6A	A0A183	80 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC22A23	A1A5C7	686 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC28A1	O00337	649 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	HMGN4	O00479	90 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FAAH	O00519	579 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CRCP	O75575	148 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FCN3	O75636	299 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SERPINI2	O75830	405 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	UBL3	O95164	117 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CCNO	P22674	350 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	GCA	P28676	217 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SELENOV	P59797	346 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC3A1	Q07837	685 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LARS2	Q15031	903 aa	Known RBP	7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	NRN1L	Q496H8	165 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DMRTC1	Q5HYR2	192 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DHRS7B	Q6IAN0	325 aa	Predicted RBP	7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PGBD2	Q6P3X8	592 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ZNF841	Q6ZN19	808 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651		Q6ZTK2	550 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FRMD7	Q6ZUT3	714 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RIMKLA	Q8IXN7	391 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	KLHDC1	Q8N7A1	406 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MFSD8	Q8NHS3	518 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TBC1D15	Q8TC07	691 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	KLF14	Q8TD94	323 aa	Predicted RBP	7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	C10orf82	Q8WW14	230 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LHX4	Q969G2	390 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TMEM246	Q9BRR3	403 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DUSP26	Q9BV47	211 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ULBP2	Q9BZM5	246 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PPA2	Q9H2U2	334 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ACOXL	Q9NUZ1	547 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	EXD2	Q9NVH0	621 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	IL20RA	Q9UHF4	553 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	GPR160	Q9UJ42	338 aa		7.11	□□□□□ -1.27
NIF3L1-206	ENST00000416651	STARD9	Q9P2P6	4700 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651		A0A1W2PRD5	423 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651		A0A1W2PRF3	423 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651		A0A1W2PRM7	423 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	TMEM178B	H3BS89	294 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PEX11A	O75192	247 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	AHSA1	O95433	338 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CPSF4	O95639	269 aa	Known RBP	7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	AK1	P00568	194 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	CD55	P08174	381 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	GSTA1	P08263	222 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	ADH4	P08319	380 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RPS2	P15880	293 aa	Known RBP	7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RPS4Y1	P22090	263 aa	Known RBP	7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PAX6	P26367	422 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	HPCAL1	P37235	193 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	EFNB2	P52799	333 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	BST1	Q10588	318 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	COX10	Q12887	443 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PGS1	Q32NB8	556 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	UGT3A2	Q3SY77	523 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC27A4	Q6P1M0	643 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SERPINA11	Q86U17	422 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LDLRAD3	Q86YD5	345 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	FGFRL1	Q8N441	504 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	PNKD	Q8N490	385 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	SLC22A24	Q8N4F4	322 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	OR4K5	Q8NGD3	323 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	OR6N1	Q8NGY5	312 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	MIPOL1	Q8TD10	442 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	R3HDM4	Q96D70	268 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	EGLN1	Q9GZT9	426 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	RNF121	Q9H920	327 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	NANOG	Q9H9S0	305 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	LRCH1	Q9Y2L9	728 aa		7.1	□□□□□ -1.27
NIF3L1-206	ENST00000416651	DNAJC15	Q9Y5T4	150 aa		7.1	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms