RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 NMD3Q96D46 503 aaKnown RBP12.13□□□□□ -0.47
VAPB-202ENST00000395802 CDADC1Q9BWV3 514 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 LINC00470Q9BZP3 86 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 SLCO5A1Q9H2Y9 848 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 TP63Q9H3D4 680 aaPredicted RBP12.13□□□□□ -0.47
VAPB-202ENST00000395802 MARCH7Q9H992 704 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 KCNG2Q9UJ96 466 aa12.13□□□□□ -0.47
VAPB-202ENST00000395802 ING1Q9UK53 422 aaPredicted RBP12.13□□□□□ -0.47
VAPB-202ENST00000395802 COA3Q9Y2R0 106 aaPredicted RBP12.13□□□□□ -0.47
VAPB-202ENST00000395802 TPRP12270 2363 aaKnown RBP12.12□□□□□ -0.47
VAPB-202ENST00000395802 C12orf71A8MTZ7 269 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 FAM171A2A8MVW0 826 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 H3BMQ9 156 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 J3QRE1 110 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 CRHP06850 196 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 NPR2P20594 1047 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 PSMB9P28065 219 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 TMBIM6P55061 237 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 PER3P56645 1201 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 SLC25A47Q6Q0C1 308 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 ERI1Q8IV48 349 aaKnown RBP12.12□□□□□ -0.47
VAPB-202ENST00000395802 SLC35F2Q8IXU6 374 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 ZNF100Q8IYN0 542 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 KLHL36Q8N4N3 616 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 ZNF454Q8N9F8 522 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 HAVCR2Q8TDQ0 301 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 NSMAFQ92636 917 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 ZNF775Q96BV0 537 aaPredicted RBP12.12□□□□□ -0.47
VAPB-202ENST00000395802 C12orf43Q96C57 262 aaKnown RBP12.12□□□□□ -0.47
VAPB-202ENST00000395802 COG8Q96MW5 612 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 FUNDC2Q9BWH2 189 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 WDR76Q9H967 626 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 ASF1BQ9NVP2 202 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 ALPK2Q86TB3 2170 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 ZZEF1O43149 2961 aa12.12□□□□□ -0.47
VAPB-202ENST00000395802 ZNF670-ZNF695F2Z2N8 137 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 DHHO43323 396 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 IL2RAP01589 272 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 SPTA1P02549 2419 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 MRPL3P09001 348 aaKnown RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 ENTPD1P49961 510 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 ADAM8P78325 824 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 FMODQ06828 376 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 NRN1LQ496H8 165 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 LRFN4Q6PJG9 635 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 B3GLCTQ6Y288 498 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 SLC16A12Q6ZSM3 486 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 FAM214BQ7L5A3 538 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 ZNF367Q7RTV3 350 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 CD163Q86VB7 1156 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 TIGD4Q8IY51 512 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 ZNF511Q8NB15 262 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 CPT1CQ8TCG5 803 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 RBM24Q9BX46 236 aaKnown RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 SEC61A2Q9H9S3 476 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 ERVK13-1Q9NX77 482 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 PTTG2Q9NZH5 202 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 UPB1Q9UBR1 384 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 LAMP5Q9UJQ1 280 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 LSM2Q9Y333 95 aaKnown RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 CAB39Q9Y376 341 aaPredicted RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 MBD3L4A6NDZ8 208 aaPredicted RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 MBD3L3A6NE82 208 aaPredicted RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 TRIM64BA6NI03 449 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 MBD3L5A6NJ08 208 aaPredicted RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 CNOT4O95628 575 aaKnown RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 PCSK6P29122 969 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 AGTR1P30556 359 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 TIMP3P35625 211 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 NAA10P41227 235 aaPredicted RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 CASP6P55212 293 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 DOC2BQ14184 412 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 GALEQ14376 348 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 MED22Q15528 200 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 ETFDHQ16134 617 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 TEX30Q5JUR7 227 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 C1orf185Q5T7R7 199 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 SLC18B1Q6NT16 456 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 KCTD20Q7Z5Y7 419 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 ALDH16A1Q8IZ83 802 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 NANOGP1Q8N7R0 232 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 SLC26A10Q8NG04 563 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 OR6N2Q8NGY6 317 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 OR52N1Q8NH53 320 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 MBD3L2Q8NHZ7 208 aaPredicted RBP12.11□□□□□ -0.47
VAPB-202ENST00000395802 RAB2BQ8WUD1 216 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 SNX33Q8WV41 574 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 ASB17Q8WXJ9 295 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 YIPF6Q96EC8 236 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 OR5M11Q96RB7 305 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 NELFAQ9H3P2 528 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 CRLF2Q9HC73 371 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 CLEC2DQ9UHP7 191 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 ENPP5Q9UJA9 477 aa12.11□□□□□ -0.47
VAPB-202ENST00000395802 A0A1W2PPL8 197 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 ZNF587BE7ETH6 402 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 ZNF593O00488 134 aaPredicted RBP12.1□□□□□ -0.47
VAPB-202ENST00000395802 SLC19A2O60779 497 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 APOL3O95236 402 aa12.1□□□□□ -0.47
VAPB-202ENST00000395802 TACSTD2P09758 323 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms