RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 CDC42EP3Q9UKI2 254 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 ZNF346Q9UL40 294 aaKnown RBP11.84□□□□□ -0.51
CXCL12-205ENST00000395794 SAMD4AQ9UPU9 718 aaKnown RBP11.84□□□□□ -0.51
CXCL12-205ENST00000395794 TMEM5Q9Y2B1 443 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 ENPP4Q9Y6X5 453 aa11.84□□□□□ -0.51
CXCL12-205ENST00000395794 FN1P02751 2386 aaKnown RBP11.84□□□□□ -0.51
CXCL12-205ENST00000395794 NAV3Q8IVL0 2385 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 TRAV27A0A087WT01 109 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 FFAR1O14842 300 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 SNX3O60493 162 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 STAMBPO95630 424 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 IGHMP01871 453 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 LCKP06239 509 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 H1F0P07305 194 aaKnown RBP11.83□□□□□ -0.52
CXCL12-205ENST00000395794 FAM157BP0CG42 384 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 MAKP20794 623 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF133P52736 654 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-205ENST00000395794 MOGQ16653 247 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 NKPD1Q17RQ9 610 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 GLYATQ6IB77 296 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 IGFN1Q86VF2 1251 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 MEX3DQ86XN8 651 aaKnown RBP11.83□□□□□ -0.52
CXCL12-205ENST00000395794 ALDH16A1Q8IZ83 802 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF786Q8N393 782 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 OR13C2Q8NGS9 318 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 BEX2Q9BXY8 128 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 BCL2L14Q9BZR8 327 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 BPESC1Q9GZL8 116 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 NMNAT1Q9HAN9 279 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-205ENST00000395794 MAN2C1Q9NTJ4 1040 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 EIF3KQ9UBQ5 218 aaKnown RBP11.83□□□□□ -0.52
CXCL12-205ENST00000395794 GRHPRQ9UBQ7 328 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 EGFL7Q9UHF1 273 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 FZR1Q9UM11 496 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 CSPG4Q6UVK1 2322 aa11.83□□□□□ -0.52
CXCL12-205ENST00000395794 TLN2Q9Y4G6 2542 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 A0A087WUU8 490 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 LOC100289279A0A1B0GTE1 492 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 XKRYO14609 159 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 SNAP29O95721 258 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 MT-ND5P03915 603 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 IGHV4-31P0DP07 118 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 CCL2P13500 99 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF23P17027 643 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 ITGA2P17301 1181 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 DRD4P21917 467 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 CCNOP22674 350 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 GIFP27352 417 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 CDAP32320 146 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 ALDH3B1P43353 468 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 GPR4P46093 362 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 CHN2P52757 468 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 UCP2P55851 309 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 KLF3P57682 345 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-205ENST00000395794 PCBD1P61457 104 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 FMODQ06828 376 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 ZBED5Q49AG3 693 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 PABPC1L2AQ5JQF8 200 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 FGD3Q5JSP0 725 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 FAM27BQ5VT28 67 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 FAM166AQ6J272 317 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 TMPRSS11FQ6ZWK6 438 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 ICA1LQ8NDH6 482 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF519Q8TB69 540 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 SYNPRQ8TBG9 265 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 SNX33Q8WV41 574 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 OR51B6Q9H340 312 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 SLCO1C1Q9NYB5 712 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 LPAR3Q9UBY5 353 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 KCNS2Q9ULS6 477 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 UGT2A1Q9Y4X1 527 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 ABCA2Q9BZC7 2435 aa11.82□□□□□ -0.52
CXCL12-205ENST00000395794 IGHV4-61A0A0C4DH41 118 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 A0A1W2PPL8 197 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 A0A1W2PRQ8 180 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 C12orf71A8MTZ7 269 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 KIAA1324LA8MWY0 1029 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-205ENST00000395794 LMX1BO60663 402 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 MMP7P09237 267 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-205ENST00000395794 ZNF16P17020 682 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-205ENST00000395794 RHCEP18577 417 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 TCN1P20061 433 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-205ENST00000395794 STOMP27105 288 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 APEX1P27695 318 aaKnown RBP11.81□□□□□ -0.52
CXCL12-205ENST00000395794 GDI2P50395 445 aaKnown RBP11.81□□□□□ -0.52
CXCL12-205ENST00000395794 ERVK-25P63136 954 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 GNGT1P63211 74 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 DGCR6Q14129 220 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 TMEM154Q6P9G4 183 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 PODNL1Q6PEZ8 512 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 SLC25A47Q6Q0C1 308 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 TBPL2Q6SJ96 375 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 UGT2A3Q6UWM9 527 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 LRP11Q86VZ4 500 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 PAQR4Q8N4S7 273 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-205ENST00000395794 RNF148Q8N7C7 305 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 ARIH2OSQ8N7S6 290 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 MCUR1Q96AQ8 359 aa11.81□□□□□ -0.52
CXCL12-205ENST00000395794 NMD3Q96D46 503 aaKnown RBP11.81□□□□□ -0.52
CXCL12-205ENST00000395794 LRRC37BQ96QE4 947 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms