RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 PM20D2Q8IYS1 436 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 CENPSQ8N2Z9 138 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 ABHD4Q8TB40 342 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 GHSRQ92847 366 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 CCDC32Q9BV29 185 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 TPK1Q9H3S4 243 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 RERGLQ9H628 205 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 WDR76Q9H967 626 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 SERINC1Q9NRX5 453 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 ACOXLQ9NUZ1 547 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 TBCCD1Q9NVR7 557 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 B4GALT7Q9UBV7 327 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 B9D1Q9UPM9 204 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 NCKAP5O14513 1909 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 IGSF10Q6WRI0 2623 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 A0A1W2PRG6 482 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 H7C1C5 153 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 DVL2O14641 736 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 CASKO14936 926 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 CBR3O75828 277 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 SERPINA3P01011 423 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 ALOX5APP20292 161 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 TCEA1P23193 301 aaKnown RBP13.49□□□□□ -0.25
SCAF11-204ENST00000395454 GDF1P27539 372 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 RPS11P62280 158 aaKnown RBP eCLIP13.49□□□□□ -0.25
SCAF11-204ENST00000395454 LCN6P62502 163 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 EGR3Q06889 387 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 PLEKHG7Q6ZR37 379 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 TPRA1Q86W33 373 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 GTPBP8Q8N3Z3 284 aaPredicted RBP13.49□□□□□ -0.25
SCAF11-204ENST00000395454 ASB10Q8WXI3 467 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 PHYHIPQ92561 330 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 KLHL15Q96M94 604 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 SDHCQ99643 169 aaPredicted RBP13.49□□□□□ -0.25
SCAF11-204ENST00000395454 PPIL3Q9H2H8 161 aaKnown RBP13.49□□□□□ -0.25
SCAF11-204ENST00000395454 MIXL1Q9H2W2 232 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 ZNF703Q9H7S9 590 aaPredicted RBP13.49□□□□□ -0.25
SCAF11-204ENST00000395454 FAIMQ9NVQ4 179 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 KLHL13Q9P2N7 655 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 KLHDC2Q9Y2U9 406 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 GRIP1Q9Y3R0 1128 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 CMAHPQ9Y471 501 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 TMEM14AQ9Y6G1 99 aa13.49□□□□□ -0.25
SCAF11-204ENST00000395454 FAM47E-STBD1D6RA91 191 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 ACOT7O00154 380 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 PHYHO14832 338 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 TRAPPC6AO75865 159 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 AKR7A3O95154 331 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 ZNF24P17028 368 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 AHCYP23526 432 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 GDI2P50395 445 aaKnown RBP13.48□□□□□ -0.25
SCAF11-204ENST00000395454 P2RY4P51582 365 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 MYBPHQ13203 477 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 OR7A5Q15622 319 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 C11orf91Q3C1V1 193 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 PAMR1Q6UXH9 720 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 SLC22A16Q86VW1 577 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 LYSMD2Q8IV50 215 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 LAX1Q8IWV1 398 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 COX4I2Q96KJ9 171 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 INTS14Q96SY0 518 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 KCNK17Q96T54 332 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 SRA1Q9HD15 236 aaKnown RBP13.48□□□□□ -0.25
SCAF11-204ENST00000395454 B3GAT1Q9P2W7 334 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 DKKL1Q9UK85 242 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 SVILO95425 2214 aa13.48□□□□□ -0.25
SCAF11-204ENST00000395454 ZFYVE26Q68DK2 2539 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 MED12Q93074 2177 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 TRAV1-2A0A0B4J238 106 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 LOC102725191A0A1B0GVB3 256 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 FAM171A2A8MVW0 826 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 UPK3AO75631 287 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 GATBO75879 557 aaKnown RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 DPP4P27487 766 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 PTGS2P35354 604 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 MAGEA5P43359 124 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 PPIAP62937 165 aaKnown RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 SLC3A1Q07837 685 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 KLRB1Q12918 225 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 DDI2Q5TDH0 399 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 RPUSD3Q6P087 351 aaKnown RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 NR2C2APQ86WQ0 139 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 TMEM251Q8N6I4 163 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 Q8NA96 180 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 OTOSQ8NHW6 89 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 TAAR6Q96RI8 345 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 TSPAN10Q9H1Z9 355 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 MRM2Q9UI43 246 aaKnown RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 GNG8Q9UK08 70 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 HDGFL3Q9Y3E1 203 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 DNAJC13O75165 2243 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 ZNF407Q9C0G0 2248 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 CENPBD1B2RD01 187 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 SHISA8B8ZZ34 492 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 TFECO14948 347 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 MAGEB4O15481 346 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 SEC14L5O43304 696 aa13.47□□□□□ -0.25
SCAF11-204ENST00000395454 GLSO94925 669 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 PLGP00747 810 aaPredicted RBP13.47□□□□□ -0.25
SCAF11-204ENST00000395454 TACSTD2P09758 323 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms