RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 CYTIPO60759 359 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 F3P13726 295 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 IL34Q6ZMJ4 242 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 OR5M8Q8NGP6 311 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 FN3KRPQ9HA64 309 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 DOCK1Q14185 1865 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 TRAV20A0A0B4J274 112 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.08■□□□□ 0.48
SHANK1-203ENST00000391813 SERINC4A6NH21 518 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 RFPL4AA6NLU0 287 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 RFPL4AL1F8VTS6 287 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 ZNF728P0DKX0 622 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 OR13C7P0DN81 318 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 RRASP10301 218 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 EPXP11678 715 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 BLVRBP30043 206 aaPredicted RBP18.08■□□□□ 0.48
SHANK1-203ENST00000391813 OR2B8PP59922 312 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 DCAF7P61962 342 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 RAET1LQ5VY80 246 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 LHFPL5Q8TAF8 219 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 LPAR4Q99677 370 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 SLC39A9Q9NUM3 307 aa18.08■□□□□ 0.48
SHANK1-203ENST00000391813 PPP5D1E7EU14 171 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 IL33O95760 270 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 CPN1P15169 458 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 ATP1B3P54709 279 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 YOD1Q5VVQ6 348 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-203ENST00000391813 WDR89Q96FK6 387 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-203ENST00000391813 C19orf43Q9BQ61 176 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 PLAC1Q9HBJ0 212 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 OMGP23515 440 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 OR13C8Q8NGS7 320 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 MAFAQ8NHW3 353 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-203ENST00000391813 FOLR1P15328 257 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 ZNF93P35789 620 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-203ENST00000391813 OR10A3P58181 314 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 OR7A5Q15622 319 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 PARM1Q6UWI2 310 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 THAP3Q8WTV1 239 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-203ENST00000391813 ADOQ96SZ5 270 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 C20orf24Q9BUV8 137 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 PRR14Q9BWN1 585 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 RNF32Q9H0A6 362 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 ZMAT3Q9HA38 289 aaKnown RBP18.07■□□□□ 0.48
SHANK1-203ENST00000391813 VSX1Q9NZR4 365 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-203ENST00000391813 A6NCN8 305 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 B3GALT4O96024 378 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 IGHG1P01857 330 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 FABP1P07148 127 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 CLDN2P57739 230 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 Q6ZRG5 221 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 TSSK2Q96PF2 358 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 B3GALT5Q9Y2C3 310 aa18.07■□□□□ 0.48
SHANK1-203ENST00000391813 A0A1B0GTL3 188 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 LEUTXA8MZ59 168 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 ST8SIA3O43173 380 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 NID1P14543 1247 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 GPR85P60893 370 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 TAF9Q16594 264 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 PLPP7Q8NBV4 271 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 SLC16A11Q8NCK7 471 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 TOLLIPQ9H0E2 274 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 DLL4Q9NR61 685 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 B4GALT7Q9UBV7 327 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 URGCP-MRPS24S4R325 110 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 ZNF831Q5JPB2 1677 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 PRAMEF27A3QJZ7 478 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 IGLV3-25P01717 112 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 HOXC8P31273 242 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 DIO1P49895 249 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 PRAMEF9Q5VWM5 478 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 PRSS38A1L453 326 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 LINC00862A6NCI5 91 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 GJE1A6NN92 205 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 HSPB2A8KAH6 182 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 DDAH2O95865 285 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 H2AFB1P0C5Y9 115 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 H3F3AP84243 136 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 PMPCAQ10713 525 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 RIN1Q13671 783 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 HSPB2Q16082 182 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 ABHD17CQ6PCB6 329 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 TMPPEQ6ZT21 453 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 ESPNLQ6ZVH7 1005 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 PLEKHA2Q9HB19 425 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 DUSP22Q9NRW4 184 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 C20orf202A1L168 122 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 SOX18P35713 384 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 NPY4RP50391 375 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 SMUG1Q53HV7 270 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 SPICQ8N5J4 248 aa18.06■□□□□ 0.48
SHANK1-203ENST00000391813 CCNL2Q96S94 520 aaPredicted RBP18.06■□□□□ 0.48
SHANK1-203ENST00000391813 RAB13P51153 203 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 ERVK-16P61578 105 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 CLINT1Q14677 625 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 ZNF836Q6ZNA1 936 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 DIO2Q92813 273 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 OR52A1Q9UKL2 312 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.05■□□□□ 0.48
SHANK1-203ENST00000391813 H3BML4 177 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms