RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 SLC35A3Q9Y2D2 325 aa9.31□□□□□ -0.92
COL5A1-202ENST00000371820 MRPS18CQ9Y3D5 142 aaKnown RBP9.31□□□□□ -0.92
COL5A1-202ENST00000371820 A0A0G2JNJ9 132 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 GTPBP1O00178 669 aaKnown RBP9.3□□□□□ -0.92
COL5A1-202ENST00000371820 DVL2O14641 736 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 GPRIN2O60269 458 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ALX3O95076 343 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 IL33O95760 270 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 IL2RAP01589 272 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ADRA2AP08913 450 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF3P17036 446 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 NPR2P20594 1047 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 EVI2BP34910 448 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 TIMP3P35625 211 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 PTGDSP41222 190 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 PITPNBP48739 271 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 GBX2P52951 348 aaPredicted RBP9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ACTA2P62736 377 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ACTG2P63267 376 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 POU6F2P78424 691 aaPredicted RBP9.3□□□□□ -0.92
COL5A1-202ENST00000371820 IFITM2Q01629 132 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 FUT5Q11128 374 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 TNK1Q13470 666 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 OR1Q1Q15612 314 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ACSF3Q4G176 576 aaPredicted RBP9.3□□□□□ -0.92
COL5A1-202ENST00000371820 CCDC58Q4VC31 144 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 SLC35D3Q5M8T2 416 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 WIPI1Q5MNZ9 446 aaPredicted RBP9.3□□□□□ -0.92
COL5A1-202ENST00000371820 OR2G6Q5TZ20 316 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 SMARCD3Q6STE5 483 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 SPNS3Q6ZMD2 512 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 CREB3L2Q70SY1 520 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 KCTD20Q7Z5Y7 419 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 NRMQ8IXM6 262 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF440Q8IYI8 595 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 SYS1Q8N2H4 156 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 LRRC17Q8N6Y2 441 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 POMGNT2Q8NAT1 580 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 SYT14Q8NB59 555 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 OR4K17Q8NGC6 315 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 OR5W2Q8NH69 310 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ZFAND1Q8TCF1 268 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 DEDD2Q8WXF8 326 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 THRSPQ92748 146 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 RADILQ96JH8 1075 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 TEAD3Q99594 435 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 TIMP4Q99727 224 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 GPA33Q99795 319 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ALG8Q9BVK2 526 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF350Q9GZX5 532 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 OR52D1Q9H346 318 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 PTGES2Q9H7Z7 377 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 GALNT9Q9HCQ5 603 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 PPP4R1LQ9P1A2 415 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 Q9UFV3 132 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 SLC6A5Q9Y345 797 aa9.3□□□□□ -0.92
COL5A1-202ENST00000371820 NAP1L6A6NFF2 107 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 CD8B2A6NJW9 211 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 INMT-MINDY4F8WBC2 141 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 LINC01387J3KSC0 135 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 CTDSPLO15194 276 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 PLA2G10O15496 165 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 TOXO94900 526 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 IGF2P01344 180 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 OR2T7P0C7T2 308 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 SAGP10523 405 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 IFI30P13284 250 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 CPN1P15169 458 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 APEX1P27695 318 aaKnown RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 MSX1P28360 303 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 LCN1P31025 176 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 KIR2DL3P43628 341 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 GZMKP49863 264 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 DSCR4P56555 118 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 GNG2P59768 71 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 RRAS2P62070 204 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 TFF3Q07654 80 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 FAPQ12884 760 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 EXOSC6Q5RKV6 272 aaKnown RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 NSUN5P2Q63ZY6 315 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 ZNF57Q68EA5 555 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 NIPAL3Q6P499 406 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 PAQR6Q6TCH4 344 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 SPATC1Q76KD6 591 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 WDR53Q7Z5U6 358 aaPredicted RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 YRDCQ86U90 279 aaKnown RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 OAFQ86UD1 273 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 KLBQ86Z14 1044 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 NKAIN4Q8IVV8 208 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 COX18Q8N8Q8 333 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 WDSUB1Q8N9V3 476 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 OR8D4Q8NGM9 314 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 OR2T27Q8NH04 317 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 OR4Q3Q8NH05 313 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 ZPLD1Q8TCW7 415 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 RNF138Q8WVD3 245 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 AKAP1Q92667 903 aaKnown RBP eCLIP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 RFT1Q96AA3 541 aa9.29□□□□□ -0.92
COL5A1-202ENST00000371820 TRMT61AQ96FX7 289 aaKnown RBP9.29□□□□□ -0.92
COL5A1-202ENST00000371820 SAMD8Q96LT4 415 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms