RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 THSD4Q6ZMP0 1018 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 FAM122BQ7Z309 247 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 JAZF1Q86VZ6 243 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 LRRC18Q8N456 261 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 OR9Q2Q8NGE9 314 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 CANT1Q8WVQ1 401 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 RASD2Q96D21 266 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 NMD3Q96D46 503 aaKnown RBP16.67■□□□□ 0.26
SYNE4-202ENST00000340477 GRIP2Q9C0E4 1043 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 IER3IP1Q9Y5U9 82 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 U3KQV3 271 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 ARID1AO14497 2285 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 IGHV2OR16-5A0A0B4J2B6 119 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 IQCMA0A1B0GVH7 501 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 SLC22A23A1A5C7 686 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 H7C1C5 153 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 SOCS2O14508 198 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 PPP1R3DO95685 299 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 ZNF26P17031 533 aaPredicted RBP16.66■□□□□ 0.26
SYNE4-202ENST00000340477 GSTM3P21266 225 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 LCN6P62502 163 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 MICAQ29983 383 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 ZNF620Q6ZNG0 422 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 CLDN22Q8N7P3 220 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 AQP11Q8NBQ7 271 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 OR4C15Q8NGM1 316 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 IGFBPL1Q8WX77 278 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 ERMAPQ96PL5 475 aaPredicted RBP16.66■□□□□ 0.26
SYNE4-202ENST00000340477 GPA33Q99795 319 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 LRMDAQ9H2I8 198 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 NOX3Q9HBY0 568 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 CA10Q9NS85 328 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 ZNF701Q9NV72 531 aaPredicted RBP16.66■□□□□ 0.26
SYNE4-202ENST00000340477 ZNF224Q9NZL3 707 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 SLC7A8Q9UHI5 535 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 CDH10Q9Y6N8 788 aa16.66■□□□□ 0.26
SYNE4-202ENST00000340477 IMPA2O14732 288 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 E2F6O75461 281 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 CIB2O75838 187 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 PAX1P15863 534 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 ZNF14P17017 642 aaPredicted RBP16.65■□□□□ 0.26
SYNE4-202ENST00000340477 MSR1P21757 451 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 CALCRP30988 508 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 CDAP32320 146 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 PCBD1P61457 104 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 RPS23P62266 143 aaKnown RBP16.65■□□□□ 0.26
SYNE4-202ENST00000340477 DAG1Q14118 895 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 RAB39AQ14964 217 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 VHLLQ6RSH7 139 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 CCDC121Q6ZUS5 278 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 MYPOPQ86VE0 399 aaPredicted RBP16.65■□□□□ 0.26
SYNE4-202ENST00000340477 TGIF2LYQ8IUE0 185 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 NUP37Q8NFH4 326 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 OR1J2Q8NGS2 313 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 HTRA1Q92743 480 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 SAMD8Q96LT4 415 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 RERGLQ9H628 205 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 CDH20Q9HBT6 801 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 BARX1Q9HBU1 254 aaPredicted RBP16.65■□□□□ 0.26
SYNE4-202ENST00000340477 UGT2A1Q9Y4X1 527 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 PMF1-BGLAPU3KQ54 211 aa16.65■□□□□ 0.26
SYNE4-202ENST00000340477 IGKV1D-43A0A0B4J1Z2 117 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 IDH3BO43837 385 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 KHDRBS3O75525 346 aaKnown RBP16.64■□□□□ 0.25
SYNE4-202ENST00000340477 TXNDC12O95881 172 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 RENP00797 406 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 SERPINA5P05154 406 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 PATE4P0C8F1 98 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 CRABP1P29762 137 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 CDKN1AP38936 164 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 FXYD6P3P58550 94 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 SNRPD2P62316 118 aaKnown RBP16.64■□□□□ 0.25
SYNE4-202ENST00000340477 SNTB2Q13425 540 aaKnown RBP16.64■□□□□ 0.25
SYNE4-202ENST00000340477 ETFDHQ16134 617 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 TBC1D28Q2M2D7 210 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 FAM27BQ5VT28 67 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 PRSS57Q6UWY2 283 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 YTHDF3Q7Z739 585 aaKnown RBP16.64■□□□□ 0.25
SYNE4-202ENST00000340477 SLC30A7Q8NEW0 376 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 OR10G2Q8NGC3 310 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 GIPC3Q8TF64 312 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 MS4A3Q96HJ5 214 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 SYT4Q9H2B2 425 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 ZNF442Q9H7R0 627 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 TBC1D23Q9NUY8 699 aa16.64■□□□□ 0.25
SYNE4-202ENST00000340477 VSX1Q9NZR4 365 aaPredicted RBP16.64■□□□□ 0.25
SYNE4-202ENST00000340477 FBXO9Q9UK97 447 aaPredicted RBP16.64■□□□□ 0.25
SYNE4-202ENST00000340477 ITPR3Q14573 2671 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 TCRBV3S1A0A5B6 114 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 OVOL3O00110 214 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 ARPC3O15145 178 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 FKBP6O75344 327 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 CST2P09228 141 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 APLNRP35414 380 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 ARHGDIAP52565 204 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 ADAM8P78325 824 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 CBX1P83916 185 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 PPP1R8Q12972 351 aaKnown RBP16.63■□□□□ 0.25
SYNE4-202ENST00000340477 C1orf146Q5VVC0 180 aa16.63■□□□□ 0.25
SYNE4-202ENST00000340477 KRT80Q6KB66 452 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms