RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 FBXL3Q9UKT7 428 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 FITM1A5D6W6 292 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 APOC3P02656 99 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 FZD2Q14332 565 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 TSSK4Q6SA08 328 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 GALNT16Q8N428 558 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 ZSCAN1Q8NBB4 408 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 RPS4Y2Q8TD47 263 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 PNPLA2Q96AD5 504 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 MFFQ9GZY8 342 aa17.94■□□□□ 0.46
CRLF3-201ENST00000324238 SLC16A7O60669 478 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 GABRA1P14867 456 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 SPOCK1Q08629 439 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 SKP2Q13309 424 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 SHISA6Q6ZSJ9 500 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 ZNF615Q8N8J6 731 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 PHYHIPQ92561 330 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 EXOSC3Q9NQT5 275 aaKnown RBP17.93■□□□□ 0.46
CRLF3-201ENST00000324238 C2orf72A6NCS6 295 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 CLDN4O14493 209 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 UTS2O95399 124 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 ASAH2BP0C7U1 165 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 PPP3CBP16298 524 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 PRSS3P35030 304 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 MOGAT2Q3SYC2 334 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 ZNF454Q8N9F8 522 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 CMTM3Q96MX0 182 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 PPA2Q9H2U2 334 aa17.93■□□□□ 0.46
CRLF3-201ENST00000324238 FREM2Q5SZK8 3169 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 SCDO00767 359 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 ICOSLGO75144 302 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 MAPK3P27361 379 aaPredicted RBP17.92■□□□□ 0.46
CRLF3-201ENST00000324238 SMAD2Q15796 467 aaKnown RBP17.92■□□□□ 0.46
CRLF3-201ENST00000324238 GLYATL3Q5SZD4 288 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 ZNF660Q6AZW8 331 aaPredicted RBP17.92■□□□□ 0.46
CRLF3-201ENST00000324238 ARSKQ6UWY0 536 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 CD163Q86VB7 1156 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 GPBAR1Q8TDU6 330 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 C4orf45Q96LM5 186 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 OR11A1Q9GZK7 315 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 EMC3Q9P0I2 261 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 KIF25Q9UIL4 384 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 MUC3AQ02505 3323 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 SOX1O00570 391 aaPredicted RBP17.92■□□□□ 0.46
CRLF3-201ENST00000324238 CD1AP06126 327 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 CSRP1P21291 193 aaKnown RBP17.92■□□□□ 0.46
CRLF3-201ENST00000324238 STEAP1BQ6NZ63 245 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 ANKRD16Q6P6B7 361 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 RTN4RL2Q86UN3 420 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 SLC51BQ86UW2 128 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 TMEM151BQ8IW70 566 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 SLC25A28Q96A46 364 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 TAS2R4Q9NYW5 299 aa17.92■□□□□ 0.46
CRLF3-201ENST00000324238 DHCR7Q9UBM7 475 aaKnown RBP17.92■□□□□ 0.46
CRLF3-201ENST00000324238 ATXN7L1Q9ULK2 861 aaPredicted RBP17.92■□□□□ 0.46
CRLF3-201ENST00000324238 SNRPGP15A8MWD9 76 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 ZNF264O43296 627 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 IL5P05113 134 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 IKZF1Q13422 519 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 SLC22A6Q4U2R8 563 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 DMRTC1Q5HYR2 192 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 PMM1Q92871 262 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 CMBLQ96DG6 245 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 WDR13Q9H1Z4 485 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 SEMA6CQ9H3T2 930 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 MRPS33Q9Y291 106 aaKnown RBP17.91■□□□□ 0.46
CRLF3-201ENST00000324238 LOC101059948A0A1B0GTJ6 334 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 RENP00797 406 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 IL10RAQ13651 578 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 NR0B2Q15466 257 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 ELP2Q6IA86 826 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 ZNF595Q8IYB9 648 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 SDR16C5Q8N3Y7 309 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 ARHGEF39Q8N4T4 335 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 OR1J4Q8NGS1 313 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 ZNF417Q8TAU3 575 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 FAM131CQ96AQ9 280 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 MRPL38Q96DV4 380 aaKnown RBP17.91■□□□□ 0.46
CRLF3-201ENST00000324238 CMKLR1Q99788 373 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 UBQLN4Q9NRR5 601 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 PFDN2Q9UHV9 154 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 TRBV5-7A0A0A0MS05 114 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 TNFRSF10CO14798 259 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 CDC40O60508 579 aaKnown RBP eCLIP17.91■□□□□ 0.46
CRLF3-201ENST00000324238 ZNF254O75437 659 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 OR6A2O95222 327 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 PLATP00750 562 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 CLPSP04118 112 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 AMY2AP04746 511 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 RAB11BQ15907 218 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 C16orf47Q6ZP98 133 aaPredicted RBP17.91■□□□□ 0.46
CRLF3-201ENST00000324238 TTLL10Q6ZVT0 673 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 FAM219AQ8IW50 185 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 JAGN1Q8N5M9 183 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 FBXW5Q969U6 566 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 FAM46BQ96A09 425 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 DCBLD2Q96PD2 775 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 S1PR5Q9H228 398 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 APMAPQ9HDC9 416 aa17.91■□□□□ 0.46
CRLF3-201ENST00000324238 SPAG17Q6Q759 2223 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms