RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 KCNK15Q9H427 330 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 SLC2A4RGQ9NR83 387 aa14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 SIRT3Q9NTG7 399 aaPredicted RBP14.28□□□□□ -0.12
CTDSP1-201ENST00000273062 MSGN1A6NI15 193 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 M0QYG6 137 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 ZNF208O43345 1280 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 CA3P07451 260 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 HNRNPA1P09651 372 aaKnown RBP eCLIP14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 OR8U9P0C7N5 309 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 CRABP1P29762 137 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 TAS2R43P59537 309 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 HSD11B2P80365 405 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 CDK5R1Q15078 307 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 SCGB2B2Q4G0G5 96 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 DNM1P46Q6ZS02 220 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 BHLHE23Q8NDY6 225 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 OR2L5Q8NG80 312 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 OR8U1Q8NH10 309 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 OR56A3Q8NH54 315 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 OR5K2Q8NHB8 316 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 ASB13Q8WXK3 278 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 SUSD6Q92537 303 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 MYADMQ96S97 322 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 TRPC4Q9UBN4 977 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 EEF1E1-BLOC1S5C9J1V9 151 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 DCTN6O00399 190 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 PHOX2AO14813 284 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 TOX3O15405 576 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 CYTIPO60759 359 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 SLC16A8O95907 504 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 QDPRP09417 244 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 FABP4P15090 132 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 NDUFV2P19404 249 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 CD200P41217 278 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 EFNB2P52799 333 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 PCBP4P57723 403 aaKnown RBP14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 GAB4Q2WGN9 574 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 PRAMEF17Q5VTA0 474 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 TMPRSS11FQ6ZWK6 438 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 BIVMQ86UB2 503 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 OR4K17Q8NGC6 315 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 DIO2Q92813 273 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 GAL3ST3Q96A11 431 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 TMEM159Q96B96 161 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 TUBA4BQ9H853 241 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 BCO1Q9HAY6 547 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 MYNNQ9NPC7 610 aa14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 PCYT1BQ9Y5K3 369 aaPredicted RBP14.27□□□□□ -0.13
CTDSP1-201ENST00000273062 HLA-AP01891 365 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 FUT5Q11128 374 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 BPIFB2Q8N4F0 458 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 FRMD1Q8N878 549 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 MIB2Q96AX9 1013 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 NRTNQ99748 197 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 NKX3-1Q99801 234 aaPredicted RBP14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 TMEM106CQ9BVX2 250 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 CSAG2Q9Y5P2 127 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 TRBV2A0A0J9YWF9 115 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 RTCAO00442 366 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 KLF4O43474 513 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 FBXO24O75426 580 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 BIKQ13323 160 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 PSRC1Q6PGN9 363 aaPredicted RBP14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 AGTRAPQ6RW13 159 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 SMPDL3AQ92484 453 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 DCUN1D4Q92564 292 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 SMIM8Q96KF7 97 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 PARP12Q9H0J9 701 aaKnown RBP14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 OR2AG1Q9H205 316 aa14.26□□□□□ -0.13
CTDSP1-201ENST00000273062 GXYLT2A0PJZ3 443 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 NPC1O15118 1278 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 LRP3O75074 770 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 RPN2P04844 631 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 IMPA1P29218 277 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 APLNRP35414 380 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 CEACAM6P40199 344 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 PRLHRP49683 370 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 LBX1P52954 281 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 NUMA1Q14980 2115 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 C9orf64Q5T6V5 341 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 NKAIN2Q5VXU1 208 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 HEPN1Q6WQI6 88 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 GKN2Q86XP6 184 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 NRROSQ86YC3 692 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 HIST3H2BBQ8N257 126 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 GALNT16Q8N428 558 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 ZSCAN4Q8NAM6 433 aaPredicted RBP14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 ZNF740Q8NDX6 193 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 OR10AD1Q8NGE0 317 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 OR51L1Q8NGJ5 315 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 BSCL2Q96G97 398 aaPredicted RBP14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 JSRP1Q96MG2 331 aaPredicted RBP14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 ARID1AO14497 2285 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 SLC5A10A0PJK1 596 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 MKRN2OSH3BPM6 223 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 SLC16A5O15375 505 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 OR1F1O43749 312 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 AKAIN1P0CW23 69 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 ADRA2CP18825 462 aa14.25□□□□□ -0.13
CTDSP1-201ENST00000273062 NDUFS1P28331 727 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms