RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 BOLLQ8N9W6 283 aaKnown RBP15.25■□□□□ 0.03
PHRF1-201ENST00000264555 WWTR1Q9GZV5 400 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 KCND3Q9UK17 655 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 GCH1P30793 250 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 RGS19P49795 217 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 FAPQ12884 760 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 PRICKLE4Q2TBC4 344 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 SLC36A2Q495M3 483 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 ZNF684Q5T5D7 378 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 CD276Q5ZPR3 534 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 UBALD2Q8IYN6 164 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 OR2W5A6NFC9 320 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 GPR171O14626 319 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 PCMT1P22061 227 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 ZNF679Q8IYX0 411 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 ESX1Q8N693 406 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 LILRB4Q8NHJ6 448 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 TSSK2Q96PF2 358 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 EMC6Q9BV81 110 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 PAPOLGQ9BWT3 736 aaKnown RBP15.24■□□□□ 0.03
PHRF1-201ENST00000264555 TRAPPC2LH3BP13 241 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 CNOT4O95628 575 aaKnown RBP15.24■□□□□ 0.03
PHRF1-201ENST00000264555 UBBP0CG47 229 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 CAMLGP49069 296 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 KIAA0907Q7Z7F0 614 aaPredicted RBP15.24■□□□□ 0.03
PHRF1-201ENST00000264555 SIRT6Q8N6T7 355 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 UCN3Q969E3 161 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 ZG16BQ96DA0 208 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 PPA2Q9H2U2 334 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 RGCCQ9H4X1 137 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 SIGLEC7Q9Y286 467 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 MAGEB4O15481 346 aaPredicted RBP15.24■□□□□ 0.03
PHRF1-201ENST00000264555 OR8U9P0C7N5 309 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 TPT1P13693 172 aaKnown RBP15.24■□□□□ 0.03
PHRF1-201ENST00000264555 DOC2BQ14184 412 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 POU4F3Q15319 338 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 STK35Q8TDR2 534 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 FER1L6-AS2Q96M78 137 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 PBDC1Q9BVG4 233 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 IL10RAQ13651 578 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 C9orf135Q5VTT2 229 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 SLC25A21Q9BQT8 299 aaPredicted RBP15.24■□□□□ 0.03
PHRF1-201ENST00000264555 URB1O60287 2271 aaKnown RBP15.24■□□□□ 0.03
PHRF1-201ENST00000264555 IMPA2O14732 288 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 SERPINE2P07093 398 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 SORDQ00796 357 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 ARL11Q969Q4 196 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 MIB2Q96AX9 1013 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 RADILQ96JH8 1075 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 ZNF286AQ9HBT8 521 aa15.24■□□□□ 0.03
PHRF1-201ENST00000264555 PCP4L1A6NKN8 68 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 IRF2P14316 349 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 TBXA2RP21731 343 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 BLVRBP30043 206 aaPredicted RBP15.23■□□□□ 0.03
PHRF1-201ENST00000264555 MECP2P51608 486 aaKnown RBP15.23■□□□□ 0.03
PHRF1-201ENST00000264555 CSF3P09919 207 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 TGM4P49221 684 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 SEC61A1P61619 476 aaKnown RBP15.23■□□□□ 0.03
PHRF1-201ENST00000264555 RNF4P78317 190 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 SELENBP1Q13228 472 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 THEM4Q5T1C6 240 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 OR5M1Q8NGP8 315 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 OR13C5Q8NGS8 318 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 APH1BQ8WW43 257 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 LOC107986453A0A1B0GWG9 222 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 PIAS2O75928 621 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 CX3CR1P49238 355 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 CAV2P51636 162 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 ZMYND11Q15326 602 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 TSC22D1Q15714 1073 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 SLC16A12Q6ZSM3 486 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 PRSS41Q7RTY9 318 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 CCDC190Q86UF4 302 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 DNAAF1Q8NEP3 725 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 LRRC3BQ96PB8 259 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 NFYAP23511 347 aaPredicted RBP15.23■□□□□ 0.03
PHRF1-201ENST00000264555 CPT2P23786 658 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 PMPCAQ10713 525 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 C8orf44Q96CB5 159 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 ASF1BQ9NVP2 202 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 CGGBP1Q9UFW8 167 aaPredicted RBP15.23■□□□□ 0.03
PHRF1-201ENST00000264555 B3GALT5Q9Y2C3 310 aa15.23■□□□□ 0.03
PHRF1-201ENST00000264555 MICAL3Q7RTP6 2002 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 A0A0D9SG52 128 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 IFITM5A6NNB3 132 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 ITGB2P05107 769 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 CHRM2P08172 466 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 RRADP55042 308 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 RFPL4BQ6ZWI9 263 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 MAML2Q8IZL2 1156 aaPredicted RBP15.22■□□□□ 0.03
PHRF1-201ENST00000264555 OR5D18Q8NGL1 313 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 MRGPRX4Q96LA9 322 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 OR51B6Q9H340 312 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 OR10A3P58181 314 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 MRM1Q6IN84 353 aaKnown RBP15.22■□□□□ 0.03
PHRF1-201ENST00000264555 ANGPTL5Q86XS5 388 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 SRRQ9GZT4 340 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 PRAMEF27A3QJZ7 478 aa15.22■□□□□ 0.03
PHRF1-201ENST00000264555 OTOL1A6NHN0 477 aaPredicted RBP15.22■□□□□ 0.03
PHRF1-201ENST00000264555 FGF9P31371 208 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms