RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 SPI1P17947 270 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 IL32P24001 234 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 SNRPGP62308 76 aaKnown RBP12.36□□□□□ -0.43
VPS25-201ENST00000253794 TBRG1Q3YBR2 411 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 FAM27BQ5VT28 67 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 TTC23Q5W5X9 447 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 FBXW10Q5XX13 1052 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 DPPA2Q7Z7J5 298 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 DMRTC2Q8IXT2 367 aaPredicted RBP12.36□□□□□ -0.43
VPS25-201ENST00000253794 SLC22A24Q8N4F4 322 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 HSD17B8Q92506 261 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 S100PBPQ96BU1 408 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 PLEKHA8Q96JA3 519 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 TSSK2Q96PF2 358 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 PSMG3-AS1Q96PY0 264 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 SPOCK3Q9BQ16 436 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 WACQ9BTA9 647 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 ACTR6Q9GZN1 396 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 MOV10Q9HCE1 1003 aaKnown RBP12.36□□□□□ -0.43
VPS25-201ENST00000253794 MOKQ9UQ07 419 aa12.36□□□□□ -0.43
VPS25-201ENST00000253794 CIB4A0PJX0 185 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 PRR23D1E9PI22 279 aaPredicted RBP12.35□□□□□ -0.43
VPS25-201ENST00000253794 PRR23D2P0DMB1 279 aaPredicted RBP12.35□□□□□ -0.43
VPS25-201ENST00000253794 OR8G3PP0DMU2 310 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 SLC2A5P22732 501 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 LAP3P28838 519 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 VHLP40337 213 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 BLVRAP53004 296 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 LSM6P62312 80 aaKnown RBP12.35□□□□□ -0.43
VPS25-201ENST00000253794 GLO1Q04760 184 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 IL18R1Q13478 541 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 ETFDHQ16134 617 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 SLC35D3Q5M8T2 416 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 LINC01590Q5TEZ4 76 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 C9orf135Q5VTT2 229 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 AADACL4Q5VUY2 407 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 NXNL2Q5VZ03 156 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 SEZ6L2Q6UXD5 910 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 ZNF813Q6ZN06 617 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 CXXC5Q7LFL8 322 aaKnown RBP12.35□□□□□ -0.43
VPS25-201ENST00000253794 CPOQ8IVL8 374 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 DEPDC4Q8N2C3 294 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 DHRSXQ8N5I4 330 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 FAM169BQ8N8A8 192 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 WDR31Q8NA23 367 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 ZNF555Q8NEP9 628 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 SLC26A10Q8NG04 563 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 NSMAFQ92636 917 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 TFAP2CQ92754 450 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 ADI1Q9BV57 179 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 HCAR1Q9BXC0 346 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 MARCH7Q9H992 704 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 SLC24A3Q9HC58 644 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 POLE4Q9NR33 117 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 B3GNT2Q9NY97 397 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 ZNF224Q9NZL3 707 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 COA3Q9Y2R0 106 aaPredicted RBP12.35□□□□□ -0.43
VPS25-201ENST00000253794 AMDHD2Q9Y303 409 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 GMPPBQ9Y5P6 360 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 SLC25A15Q9Y619 301 aa12.35□□□□□ -0.43
VPS25-201ENST00000253794 FAM183AA6NL82 134 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 TLX2O43763 284 aaPredicted RBP12.34□□□□□ -0.43
VPS25-201ENST00000253794 MPZL2O60487 215 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 GLCEO94923 617 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 THBDP07204 575 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 CST2P09228 141 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 B4GALT1P15291 398 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 GABRB1P18505 474 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 MSR1P21757 451 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 CAPGP40121 348 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 HSPA13P48723 471 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 AQP4P55087 323 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 HSF2Q03933 536 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 TSC22D1Q15714 1073 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 TAB1Q15750 504 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 HIKESHIQ53FT3 197 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 ZNF691Q5VV52 312 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 PLBD1Q6P4A8 553 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 KLHL24Q6TFL4 600 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 C22orf34Q6ZV56 151 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 USP51Q70EK9 711 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 SYT9Q86SS6 491 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 TCEANCQ8N8B7 351 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 OR9Q1Q8NGQ5 310 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 RHOXF1Q8NHV9 184 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 FAM81AQ8TBF8 368 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 ZNRF4Q8WWF5 429 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 DACH2Q96NX9 599 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 SRA1Q9HD15 236 aaKnown RBP12.34□□□□□ -0.43
VPS25-201ENST00000253794 ZNF226Q9NYT6 803 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 CRNNQ9UBG3 495 aaPredicted RBP12.34□□□□□ -0.43
VPS25-201ENST00000253794 NDRG3Q9UGV2 375 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 KCNG2Q9UJ96 466 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 HSPE1-MOB4S4R3N1 261 aa12.34□□□□□ -0.43
VPS25-201ENST00000253794 TUBAL3A6NHL2 446 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 PRSS44E7EML9 344 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 M0R129 80 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 SEC14L2O76054 403 aa12.33□□□□□ -0.44
VPS25-201ENST00000253794 FARS2O95363 451 aaKnown RBP12.33□□□□□ -0.44
VPS25-201ENST00000253794 SCG5P05408 212 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms