RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 LINC00696Q6ZRV3 163 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 OR6V1Q8N148 313 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 OR14L1PQ8NHC6 308 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 PRR7Q8TB68 274 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 RPS4Y2Q8TD47 263 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 AP3S1Q92572 193 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 JSRP1Q96MG2 331 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 TIMP4Q99727 224 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 TTYH2Q9BSA4 534 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 MRPL13Q9BYD1 178 aaKnown RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 WDR12Q9GZL7 423 aaKnown RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 OR51E2Q9H255 320 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF703Q9H7S9 590 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 B3GAT1Q9P2W7 334 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 CRNNQ9UBG3 495 aaPredicted RBP11.77□□□□□ -0.53
SLIRP-201ENST00000238688 HRH3Q9Y5N1 445 aa11.77□□□□□ -0.53
SLIRP-201ENST00000238688 ACOT7O00154 380 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 TRAF3IP2O43734 574 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF254O75437 659 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 GPX5O75715 221 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 RGS9O75916 674 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 AKR7A3O95154 331 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 APOL3O95236 402 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 TFP02787 698 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 KRT8P05787 483 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 GYPBP06028 91 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 IFNGR1P15260 489 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 CELP19835 753 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 GDF1P27539 372 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 DNASE1L1P49184 302 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF133P52736 654 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 SIRPAP78324 504 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 ROM1Q03395 351 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 RUNX1T1Q06455 604 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 DCTN2Q13561 401 aaKnown RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF829Q3KNS6 432 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF684Q5T5D7 378 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 DMKNQ6E0U4 476 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 SLC25A25Q6KCM7 469 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 SLC18B1Q6NT16 456 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 FDX2Q6P4F2 183 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 SLC22A16Q86VW1 577 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 TPRA1Q86W33 373 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 KLBQ86Z14 1044 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 PM20D2Q8IYS1 436 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 FAM83FQ8NEG4 500 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 OTOSQ8NHW6 89 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 NDNFQ8TB73 568 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 TBC1D15Q8TC07 691 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 RPL3LQ92901 407 aaKnown RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 CPNE4Q96A23 557 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 SMIM19Q96E16 107 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 SCMH1Q96GD3 660 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 C4orf36Q96KX1 117 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 SFXN2Q96NB2 322 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 SLIRPQ9GZT3 109 aaKnown RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 NUAK2Q9H093 628 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 ACKR4Q9NPB9 350 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 TXNL4BQ9NX01 149 aaKnown RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 PLA2G3Q9NZ20 509 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 PLEKHB1Q9UF11 243 aaPredicted RBP11.76□□□□□ -0.53
SLIRP-201ENST00000238688 LAMP5Q9UJQ1 280 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 RCE1Q9Y256 329 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 PEX16Q9Y5Y5 336 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 ALPK2Q86TB3 2170 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 ITPR2Q14571 2701 aa11.76□□□□□ -0.53
SLIRP-201ENST00000238688 PNMA8CA0A1B0GUJ8 204 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 ANKRD61A6NGH8 418 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 METTL15A6NJ78 407 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF726A6NNF4 738 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 SLC16A7O60669 478 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 SERPINI2O75830 405 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 GLSO94925 669 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-201ENST00000238688 WDPCPO95876 746 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 SP1P08047 785 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 ALOX5APP20292 161 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 PTGS2P35354 604 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 PEX19P40855 299 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 ENTPD1P49961 510 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 TNFSF10P50591 281 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 RORCP51449 518 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 GFRA1P56159 465 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 RASGEF1BQ0VAM2 473 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 CDK5R1Q15078 307 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 STK11Q15831 433 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 HIST3H3Q16695 136 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 ZNF324BQ6AW86 544 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-201ENST00000238688 RPUSD3Q6P087 351 aaKnown RBP11.75□□□□□ -0.53
SLIRP-201ENST00000238688 ZFP62Q8NB50 900 aaPredicted RBP11.75□□□□□ -0.53
SLIRP-201ENST00000238688 ST6GALNAC3Q8NDV1 305 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 NOXO1Q8NFA2 376 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 ZPLD1Q8TCW7 415 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 BORCS5Q969J3 196 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 TAAR6Q96RI8 345 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 NPAS1Q99742 590 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 CENPOQ9BU64 300 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 PLGRKTQ9HBL7 147 aa11.75□□□□□ -0.53
SLIRP-201ENST00000238688 SRA1Q9HD15 236 aaKnown RBP11.75□□□□□ -0.53
SLIRP-201ENST00000238688 EXOSC4Q9NPD3 245 aaKnown RBP11.75□□□□□ -0.53
SLIRP-201ENST00000238688 CENPEQ02224 2701 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms