RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 PLEKHA6Q9Y2H5 1048 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 H3BSH0 61 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 KCNAB3O43448 404 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 CDC40O60508 579 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 ALOX12BO75342 701 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 GLCEO94923 617 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 CD74P04233 296 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 ZNF735P0CB33 412 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 LIPCP11150 499 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 TPT1P13693 172 aaKnown RBP16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 TSFMP43897 325 aaKnown RBP16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 ENPP2Q13822 863 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 MLF2Q15773 248 aaPredicted RBP16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 ZCCHC12Q6PEW1 402 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 PARGQ86W56 976 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 ZNF511Q8NB15 262 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 RNF141Q8WVD5 230 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 INTS12Q96CB8 462 aaKnown RBP16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 RASD2Q96D21 266 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 RBM18Q96H35 190 aaKnown RBP16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 COX14Q96I36 57 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 NRIP2Q9BQI9 281 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 FBXL21Q9UKT6 434 aa16.02■□□□□ 0.16
CDKN1B-201ENST00000228872 ATG2BQ96BY7 2078 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 TMEM72A0PK05 275 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 LDB3O75112 727 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 FARS2O95363 451 aaKnown RBP16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 RAB28P51157 221 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 PJVKQ0ZLH3 352 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 GFOD2Q3B7J2 385 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 ARHGAP40Q5TG30 622 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 NAA40Q86UY6 237 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 ZNF595Q8IYB9 648 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 SLC30A7Q8NEW0 376 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 TMEM106AQ96A25 262 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 SEH1LQ96EE3 360 aa16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 RCC2Q9P258 522 aaKnown RBP16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 ZNF346Q9UL40 294 aaKnown RBP16.02■□□□□ 0.15
CDKN1B-201ENST00000228872 ABHD16AO95870 558 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 HLA-GP17693 338 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 S100PP25815 95 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 HYAL4Q2M3T9 481 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 MST1LQ2TV78 715 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 C2orf76Q3KRA6 126 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 ALG10BQ5I7T1 473 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 IL34Q6ZMJ4 242 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 ERN2Q76MJ5 926 aaKnown RBP16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 EDARADDQ8WWZ3 215 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 CPNE2Q96FN4 548 aaPredicted RBP16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 INSM2Q96T92 566 aaPredicted RBP16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 ALG12Q9BV10 488 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 ATG5Q9H1Y0 275 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 FAM96BQ9Y3D0 163 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 TRBV23-1A0A0A0MS06 115 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 ZNF705EA8MWA4 302 aaPredicted RBP16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 C1orf196B1AJZ1 125 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 GATCO43716 136 aaKnown RBP16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 NDUFS6O75380 124 aaKnown RBP16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 FOSL1P15407 271 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 SNRPNP63162 240 aaKnown RBP16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 EIF2S3LQ2VIR3 472 aaKnown RBP16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 GXYLT1Q4G148 440 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 DPY19L2P2Q6ZN68 376 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 CACUL1Q86Y37 369 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 BAP18Q8IXM2 172 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 PAQR4Q8N4S7 273 aaPredicted RBP16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 OR51A4Q8NGJ6 313 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 OR13C8Q8NGS7 320 aa16.01■□□□□ 0.15
CDKN1B-201ENST00000228872 GOLGA4Q13439 2230 aaKnown RBP16■□□□□ 0.15
CDKN1B-201ENST00000228872 OR4C45A6NMZ5 311 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 ITGA5P08648 1049 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 PGAM2P15259 253 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 ABCD3P28288 659 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 P2RY2P41231 377 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 TNFRSF4P43489 277 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 ALG11Q2TAA5 492 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 PRRT3Q5FWE3 981 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 NKAPLQ5M9Q1 402 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 EXOSC6Q5RKV6 272 aaKnown RBP16■□□□□ 0.15
CDKN1B-201ENST00000228872 ZAR1Q86SH2 424 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 TMED6Q8WW62 240 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 FAM3DQ96BQ1 224 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 ADAD1Q96M93 576 aaKnown RBP16■□□□□ 0.15
CDKN1B-201ENST00000228872 EGLN1Q9GZT9 426 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 C19orf53Q9UNZ5 99 aaPredicted RBP16■□□□□ 0.15
CDKN1B-201ENST00000228872 LOC100289279A0A1B0GTE1 492 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 AK1P00568 194 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 FBXO45P0C2W1 286 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 ZBTB25P24278 435 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 CFPP27918 469 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 RAB11BQ15907 218 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 SCGB2B2Q4G0G5 96 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 SLC16A9Q7RTY1 509 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 BPIFB2Q8N4F0 458 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 ZNF676Q8N7Q3 588 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 OR2L8Q8NGY9 312 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 SELENOIQ9C0D9 397 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 SEMA6CQ9H3T2 930 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 CD207Q9UJ71 328 aa16■□□□□ 0.15
CDKN1B-201ENST00000228872 VSIG4Q9Y279 399 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms