RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 LRRC28Q86X40 367 aaPredicted RBP11.62□□□□□ -0.55
SNX1-214ENST00000625244 C1orf174Q8IYL3 243 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 NATD1Q8N6N6 113 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 ZSCAN4Q8NAM6 433 aaPredicted RBP11.62□□□□□ -0.55
SNX1-214ENST00000625244 ICA1LQ8NDH6 482 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 SLC30A7Q8NEW0 376 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 SSMEM1Q8WWF3 244 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 COQ8BQ96D53 544 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 FAM71F1Q96KD3 344 aaPredicted RBP11.62□□□□□ -0.55
SNX1-214ENST00000625244 OXGR1Q96P68 337 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 DPY30Q9C005 99 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 WDR55Q9H6Y2 383 aaPredicted RBP11.62□□□□□ -0.55
SNX1-214ENST00000625244 IL20RAQ9UHF4 553 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 FBXL3Q9UKT7 428 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 IGHV2-70DA0A0C4DH43 119 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 G6PDP11413 515 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 IDO1P14902 403 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 UCP2P55851 309 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 STX1BP61266 288 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 COL10A1Q03692 680 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 PTGR1Q14914 329 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 MOGQ16653 247 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 ATAD3BQ5T9A4 648 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 TNFAIP8L2Q6P589 184 aaPredicted RBP11.61□□□□□ -0.55
SNX1-214ENST00000625244 C6orf89Q6UWU4 347 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 SKA3Q8IX90 412 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 CADM2Q8N3J6 435 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 KRTCAP2Q8N6L1 136 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 CPEB3Q8NE35 698 aaKnown RBP11.61□□□□□ -0.55
SNX1-214ENST00000625244 MFSD8Q8NHS3 518 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 MIPOL1Q8TD10 442 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 DACT3Q96B18 629 aaPredicted RBP11.61□□□□□ -0.55
SNX1-214ENST00000625244 ZBTB18Q99592 522 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 PTDSS2Q9BVG9 487 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 EGLN1Q9GZT9 426 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 C16orf95Q9H693 158 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 TCF7L2Q9NQB0 619 aa11.61□□□□□ -0.55
SNX1-214ENST00000625244 RNF103-CHMP3A0A140T963 221 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 ZSCAN5BA6NJL1 495 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 UBDO15205 165 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 GKN3PP0CG01 181 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 THRBP10828 461 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 FUT4P22083 530 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 CLNS1AP54105 237 aaKnown RBP11.6□□□□□ -0.55
SNX1-214ENST00000625244 CLDN8P56748 225 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 EGR3Q06889 387 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 DBPQ10586 325 aaPredicted RBP11.6□□□□□ -0.55
SNX1-214ENST00000625244 ZMYND11Q15326 602 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 EPGNQ6UW88 154 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 VPS37AQ8NEZ2 397 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 RAB40AQ8WXH6 277 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 PHF21AQ96BD5 680 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 MAELQ96JY0 434 aaKnown RBP11.6□□□□□ -0.55
SNX1-214ENST00000625244 FOXB1Q99853 325 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 EMC6Q9BV81 110 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 CCDC134Q9H6E4 229 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 CDH20Q9HBT6 801 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 TMEM106BQ9NUM4 274 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 RLIMQ9NVW2 624 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 TRIM33Q9UPN9 1127 aa11.6□□□□□ -0.55
SNX1-214ENST00000625244 TANC2Q9HCD6 1990 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 K7EIL1 84 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 GPR37O15354 613 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 MFN2O95140 757 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 AHSA1O95433 338 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 AGR2O95994 175 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 IGHV4-59P01825 116 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 UQCRBP14927 111 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 RPS5P46782 204 aaKnown RBP11.59□□□□□ -0.55
SNX1-214ENST00000625244 BTG1P62324 171 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 PMS2P3Q13401 168 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 DPY19L1Q2PZI1 675 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 GPAT3Q53EU6 434 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 MRPL2Q5T653 305 aaKnown RBP11.59□□□□□ -0.55
SNX1-214ENST00000625244 GPR157Q5UAW9 335 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 ZNF774Q6NX45 483 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 CLECL1Q8IZS7 167 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 TBC1D15Q8TC07 691 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 ITPKCQ96DU7 683 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 LRR1Q96L50 414 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 CCDC28BQ9BUN5 200 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 SSBP3Q9BWW4 388 aaPredicted RBP11.59□□□□□ -0.55
SNX1-214ENST00000625244 BCL2L14Q9BZR8 327 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 NSRP1Q9H0G5 558 aaKnown RBP11.59□□□□□ -0.55
SNX1-214ENST00000625244 FGFR1OP2Q9NVK5 253 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 AIG1Q9NVV5 245 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.59□□□□□ -0.55
SNX1-214ENST00000625244 LRCH1Q9Y2L9 728 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 GPR45Q9Y5Y3 372 aa11.59□□□□□ -0.55
SNX1-214ENST00000625244 STAB2Q8WWQ8 2551 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 A0A0G2JND7 137 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 ZNF816-ZNF321PA0A0X1KG74 233 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 CEACAM18A8MTB9 384 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 E9PBE3 544 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 TNFRSF13BO14836 293 aaPredicted RBP11.58□□□□□ -0.56
SNX1-214ENST00000625244 AKAP8O43823 692 aaKnown RBP11.58□□□□□ -0.56
SNX1-214ENST00000625244 PPP1R3DO95685 299 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 WNT2P09544 360 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 HLA-DOBP13765 273 aa11.58□□□□□ -0.56
SNX1-214ENST00000625244 GTF2E2P29084 291 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms