RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 HTR3EA5X5Y0 456 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 GMNCA6NCL1 334 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 FAM157AC9JC47 383 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 ASAH2BP0C7U1 165 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 PGA4P0DJD7 388 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 PGA3P0DJD8 388 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 LIPAP38571 399 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 MAD2L1BPQ15013 274 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 AGBL2Q5U5Z8 902 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 TREML1Q86YW5 311 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 CPEB3Q8NE35 698 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 SEMA6DQ8NFY4 1073 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 SLC26A7Q8TE54 656 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 RAB1CQ92928 201 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 WFDC6Q9BQY6 131 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 RBM4Q9BWF3 364 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 SIAEQ9HAT2 523 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 MYEF2Q9P2K5 600 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 TRIM33Q9UPN9 1127 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 DYSFO75923 2080 aa15.23■□□□□ 0.03
SHKBP1-227ENST00000602011 A0A0G2JMP0 313 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 A0A0X1KG70 313 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 M0R3H8 397 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 RGS9O75916 674 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 VENTXO95231 258 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 IGHV3-13P01766 116 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 LCKP06239 509 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 PATE4P0C8F1 98 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 CD247P20963 164 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 DRD4P21917 467 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 APLNRP35414 380 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 ZNF133P52736 654 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 CLRN1P58418 232 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 SLC3A1Q07837 685 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 HFEQ30201 348 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 NANOGNBQ7Z5D8 188 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 CARM1Q86X55 608 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 PTOV1Q86YD1 416 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 RBM15BQ8NDT2 890 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 OR4M2Q8NGB6 313 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 OR4K5Q8NGD3 323 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 SGMS2Q8NHU3 365 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 MCHR2Q969V1 340 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 ZBTB9Q96C00 473 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 SEPHS2Q99611 448 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 CGREF1Q99674 301 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 SH3GL3Q99963 347 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 EBF4Q9BQW3 602 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 MRPL13Q9BYD1 178 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 SMURF2Q9HAU4 748 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 CYSLTR2Q9NS75 346 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 EIF3KQ9UBQ5 218 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 FZR1Q9UM11 496 aa15.22■□□□□ 0.03
SHKBP1-227ENST00000602011 IGHV1-69-2A0A0G2JMI3 117 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 TMEM89A2RUT3 159 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 NPIPB13A6NJU9 1138 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 CPSF4LA6NMK7 179 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 CLDN25C9JDP6 229 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 NPIPB4C9JG80 1138 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 ANGPT2O15123 496 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 NCR1O76036 304 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 FAM157BP0CG42 384 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 UMPSP11172 480 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 RBM34P42696 430 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 DAP3P51398 398 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 HILS1P60008 231 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 CCL8P80075 99 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 ZNF718Q3SXZ3 478 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 DHDDSQ86SQ9 333 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 WDFY1Q8IWB7 410 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 GPR32P1Q8NGA4 272 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 FGFBP3Q8TAT2 258 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 FNDC8Q8TC99 324 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 ELMOD3Q96FG2 381 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 SH3GL1Q99961 368 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 SUCNR1Q9BXA5 334 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 NARFLQ9H6Q4 476 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 ZNF665Q9H7R5 613 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 KAT8Q9H7Z6 458 aaKnown RBP15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 CGGBP1Q9UFW8 167 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 SLC7A7Q9UM01 511 aa15.21■□□□□ 0.03
SHKBP1-227ENST00000602011 MCIDASD6RGH6 385 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 BLOC1S5-TXNDC5H3BN57 136 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 SPRY1O43609 319 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 LYPD3O95274 346 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 CLPTM1O96005 669 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 MT-ND1P03886 318 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 MAGEB1P43366 347 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 ARFIP2P53365 341 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 MRPS34P82930 218 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 HSF2Q03933 536 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 TAF11Q15544 211 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 BEND6Q5SZJ8 279 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 C10orf128Q5T292 105 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 CCDC80Q76M96 950 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 NANPQ8TBE9 248 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 LIPHQ8WWY8 451 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 GCDHQ92947 438 aaPredicted RBP15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 DIRC2Q96SL1 478 aa15.2■□□□□ 0.02
SHKBP1-227ENST00000602011 EGLN1Q9GZT9 426 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms