RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 RBM39Q14498 530 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 MLC1Q15049 377 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 PON3Q15166 354 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 IRF4Q15306 451 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 LINC00303Q3SY05 128 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 EIPR1Q53HC9 387 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 NKAIN2Q5VXU1 208 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 MBOAT2Q6ZWT7 520 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 TMEM17Q86X19 198 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 VRK2Q86Y07 508 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 NRROSQ86YC3 692 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 CNEP1R1Q8N9A8 125 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 RCBTB1Q8NDN9 531 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 OR2A12Q8NGT7 310 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 SMAP2Q8WU79 429 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 PATE1Q8WXA2 126 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 PNPLA2Q96AD5 504 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 SGK3Q96BR1 496 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 SLC41A3Q96GZ6 507 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 C10orf90Q96M02 699 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 CMTM3Q96MX0 182 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 MS4A4EQ96PG1 132 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 ADOQ96SZ5 270 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 CD180Q99467 661 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 MICU1Q9BPX6 476 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 ZFYVE21Q9BQ24 234 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 TGIF2Q9GZN2 237 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 OR52D1Q9H346 318 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 EXOSC3Q9NQT5 275 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 FAM212BQ9NTI7 297 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 AK6Q9Y3D8 172 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 PKDREJQ9NTG1 2253 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 UNC119BA6NIH7 251 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 NPIPA2E9PIF3 369 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 NPIPA3F8WFD2 350 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 KLF4O43474 513 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 NARSO43776 548 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 HTR3BO95264 441 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 IGHV2-70P01814 119 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 SPARCP09486 303 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 ADCYAP1P18509 176 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 PYCR1P32322 319 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 TRHRP34981 398 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 NAA10P41227 235 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 NUBP1P53384 320 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 METAP1P53582 386 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 MAT1AQ00266 395 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 SMAD4Q13485 552 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 PRAMEF8Q5VWM4 474 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 PRAMEF7Q5VXH5 474 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 ZNF660Q6AZW8 331 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 DMKNQ6E0U4 476 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 HEPHL1Q6MZM0 1159 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 LCTLQ6UWM7 567 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 OR9A4Q8NGU2 314 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 RXFP4Q8TDU9 374 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 TMEM255BQ8WV15 326 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 FCAMRQ8WWV6 532 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 GHSRQ92847 366 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 ZNF764Q96H86 408 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 AMDHD1Q96NU7 426 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 MYADMQ96S97 322 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 C1QTNF2Q9BXJ5 285 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 SLC25A32Q9H2D1 315 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 TAS2R10Q9NYW0 307 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 COMMD9Q9P000 198 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 OPN4Q9UHM6 478 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 ZMIZ1Q9ULJ6 1067 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 NTNG1Q9Y2I2 539 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 GPR55Q9Y2T6 319 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 SLC6A5Q9Y345 797 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 DOCK8Q8NF50 2099 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 MEX3AA1L020 520 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 FAM171A2A8MVW0 826 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 F5H5P2 479 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 TMPRSS11DO60235 418 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 RAD1O60671 282 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 SCGNO76038 276 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 FARS2O95363 451 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 CSTBP04080 98 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 HMGN2P05204 90 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 UBBP0CG47 229 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 UBCP0CG48 685 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 ZNF35P13682 527 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 ZNF20P17024 532 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 FCARP24071 287 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 MAPK3P27361 379 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 CERS1P27544 350 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 ADH7P40394 386 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 VASPP50552 380 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 RPS27AP62979 156 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 UBA52P62987 128 aaKnown RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 ACY1Q03154 408 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 TCEAL6Q6IPX3 200 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 HAGHLQ6PII5 290 aaPredicted RBP4.78□□□□□ -1.64
PROM1-220ENST00000540805 LRRN1Q6UXK5 716 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 OVCH1Q7RTY7 1134 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 GDF7Q7Z4P5 450 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 CLEC1AQ8NC01 280 aa4.78□□□□□ -1.64
PROM1-220ENST00000540805 OR2L3Q8NG85 312 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms