RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 OR8U8P0C7N1 319 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 FABP4P15090 132 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 GSK3AP49840 483 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 SNTB1Q13884 538 aaKnown RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 ADIRFQ15847 76 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 IL34Q6ZMJ4 242 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 KLHDC8BQ8IXV7 354 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM217Q8N7C4 229 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM102Q8N9M5 508 aaPredicted RBP9.19□□□□□ -0.94
COL4A6-208ENST00000538570 OR52I1Q8NGK6 324 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 UBTD1Q9HAC8 227 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 EMC9Q9Y3B6 208 aa9.19□□□□□ -0.94
COL4A6-208ENST00000538570 LOC100289279A0A1B0GTE1 492 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 OR10J4P0C629 311 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 GCAP28676 217 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 ILKQ13418 452 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 LPAL2Q16609 132 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 ADPRMQ3LIE5 342 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 FOXB2Q5VYV0 432 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 PRICKLE2Q7Z3G6 844 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 SLC46A3Q7Z3Q1 461 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 OR10D4PQ8NGN7 298 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 CD207Q9UJ71 328 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 PHRF1Q9P1Y6 1649 aaKnown RBP9.18□□□□□ -0.94
COL4A6-208ENST00000538570 P2RY10O00398 339 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 TIMP1P01033 207 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 FAM209AQ5JX71 171 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM31Q5JXX7 168 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 TBPL2Q6SJ96 375 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 DPY19L2P2Q6ZN68 376 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 ADGRF3Q8IZF5 1079 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 CMTM2Q8TAZ6 248 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 VAMP8Q9BV40 100 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 PISDQ9UG56 409 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 RAB22AQ9UL26 194 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 H0YIV9 168 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 CER1O95813 267 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF133P52736 654 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-208ENST00000538570 LILRA2Q8N149 483 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 NKAIN3Q8N8D7 197 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 C19orf47Q8N9M1 422 aaKnown RBP9.18□□□□□ -0.94
COL4A6-208ENST00000538570 INSM2Q96T92 566 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-208ENST00000538570 A4GALTQ9NPC4 353 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 PDLIM7Q9NR12 457 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM184BQ9Y519 407 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-208ENST00000538570 RGPD8O14715 1765 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-208ENST00000538570 K7EQM0 130 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 IAH1Q2TAA2 248 aaPredicted RBP9.18□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF321PQ8N8H1 164 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 OR5D18Q8NGL1 313 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 NAT6Q93015 286 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 TMEM18Q96B42 140 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 OR52A1Q9UKL2 312 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 M0QYG6 137 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 PMPCAQ10713 525 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 PCK2Q16822 640 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 ADGRE4PQ86SQ3 457 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 CATSPERDQ86XM0 798 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 SLC43A2Q8N370 569 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 ARFGAP1Q8N6T3 406 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 KLHDC1Q8N7A1 406 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 STT3BQ8TCJ2 826 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 HRASLS5Q96KN8 279 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 NMNAT3Q96T66 252 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 SSUH2Q9Y2M2 353 aa9.18□□□□□ -0.94
COL4A6-208ENST00000538570 hCG_1809904A0A1W2PP81 198 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 A0A1W2PPE2 198 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 A0A1W2PR64 198 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 A0A1W2PRV1 198 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 DVL1O14640 695 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 HSD17B6O14756 317 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 GSTP1P09211 210 aaKnown RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ADRA1AP35348 466 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 HAAOP46952 286 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 RPL29P47914 159 aaKnown RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 SSR4P51571 173 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 DVL1P1P54792 670 aaPredicted RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 RPL24P83731 157 aaKnown RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 FOXK2Q01167 660 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 MARCH8Q5T0T0 291 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ANKLE1Q8NAG6 615 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 POFUT1Q9H488 388 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 TMED7-TICAM2A0A0A6YYA0 188 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 IGHEP01854 428 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 IL3RAP26951 378 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF93P35789 620 aaPredicted RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 BTG1P62324 171 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 ZNF239Q16600 458 aaKnown RBP9.17□□□□□ -0.94
COL4A6-208ENST00000538570 CDKN3Q16667 212 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 NHSL2Q5HYW2 709 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 CYB5R2Q6BCY4 276 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 SLC38A6Q8IZM9 456 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 SLC35G3Q8N808 338 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 DDOQ99489 341 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 FBXO8Q9NRD0 319 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 B3GAT1Q9P2W7 334 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 LHX3Q9UBR4 397 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 MUTYHQ9UIF7 546 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 USP22Q9UPT9 525 aa9.17□□□□□ -0.94
COL4A6-208ENST00000538570 TMED7Q9Y3B3 224 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms