RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 TREM2Q9NZC2 230 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 GRIP1Q9Y3R0 1128 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 DYSFO75923 2080 aa16.84■□□□□ 0.29
TNFRSF1B-204ENST00000536782 IGLV3-9A0A075B6K5 115 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 IQCMA0A1B0GVH7 501 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 A0A1W2PRG6 482 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 C17orf100A8MU93 164 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MCIDASD6RGH6 385 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 WNT9BO14905 357 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 EDF1O60869 148 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 RP2O75695 350 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SNAP29O95721 258 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 LCKP06239 509 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 GAAP10253 952 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ZNF250P15622 560 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 RAD52P43351 418 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MAGEB1P43366 347 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 HIST3H3Q16695 136 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 VMACQ2NL98 169 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TMEM154Q6P9G4 183 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 OR51F2Q8NH61 342 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ZNF519Q8TB69 540 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 C11orf40Q8WZ69 217 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ZNF347Q96SE7 839 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 BCL2L14Q9BZR8 327 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 METTL17Q9H7H0 456 aaPredicted RBP16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 HINT3Q9NQE9 182 aaKnown RBP16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SLCO1C1Q9NYB5 712 aa16.83■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CENPBD1B2RD01 187 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MGRN1O60291 552 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MT-ND1P03886 318 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 F13BP05160 661 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 UCP2P55851 309 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ERVS71-1P61550 626 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CCL8P80075 99 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MYBPC1Q00872 1141 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 RUNX1T1Q06455 604 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 RPL18Q07020 188 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 PCGF3Q3KNV8 242 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MMEL1Q495T6 779 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 DEF8Q6ZN54 512 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CCDC80Q76M96 950 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 HDDC2Q7Z4H3 204 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 RBM15BQ8NDT2 890 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 NOXO1Q8NFA2 376 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TSPAN32Q96QS1 320 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MRPL13Q9BYD1 178 aaKnown RBP16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 NANOGQ9H9S0 305 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SH3GLB1Q9Y371 365 aa16.82■□□□□ 0.28
TNFRSF1B-204ENST00000536782 WNK2Q9Y3S1 2297 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 A0A0A6YYJ9 748 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 FUT1P19526 365 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 RBM34P42696 430 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 GZMMP51124 257 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 DAP3P51398 398 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CRYBA2P53672 197 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 UGT2B15P54855 530 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 LMO4P61968 165 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SCGB2A2Q13296 93 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MOGQ16653 247 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 HSP90B2PQ58FF3 399 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SHQ1Q6PI26 577 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MEX3DQ86XN8 651 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 LRRC18Q8N456 261 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SYT14Q8NB59 555 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ICA1LQ8NDH6 482 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ASB10Q8WXI3 467 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 LRRC37BQ96QE4 947 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SEPHS2Q99611 448 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 KCNN2Q9H2S1 579 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 NPHS2Q9NP85 383 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MED4Q9NPJ6 270 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 INIPQ9NRY2 104 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 NKIRAS2Q9NYR9 191 aa16.81■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CDC14BO60729 498 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TRMUO75648 421 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 OR7A10O76100 309 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ANPEPP15144 967 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 ACADSP16219 412 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 APLNRP35414 380 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TAS2R41P59536 307 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 HSF2Q03933 536 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CYLC2Q14093 348 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 NANOGP8Q6NSW7 305 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 NKAIN4Q8IVV8 208 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 PFN4Q8NHR9 129 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SGTBQ96EQ0 304 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 SH3GL1Q99961 368 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 POLR2J2Q9GZM3 115 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 POLR2J3Q9H1A7 115 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 STX18Q9P2W9 335 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 BAG5Q9UL15 447 aa16.8■□□□□ 0.28
TNFRSF1B-204ENST00000536782 TRAV20A0A0B4J274 112 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 A0A0G2JND7 137 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 IGF2P01344 180 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MT-ND5P03915 603 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 MMP7P09237 267 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 DRD4P21917 467 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 AQP2P41181 271 aa16.79■□□□□ 0.28
TNFRSF1B-204ENST00000536782 CRYBB2P43320 205 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms