RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PYCR1P32322 319 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 GGT2P36268 569 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 CENPAP49450 140 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 FAM27E3Q08E93 113 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 SNTB1Q13884 538 aaKnown RBP12.07□□□□□ -0.48
CD44-224ENST00000526669 HIST3H3Q16695 136 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 ZNF362Q5T0B9 420 aaPredicted RBP12.07□□□□□ -0.48
CD44-224ENST00000526669 XKRXQ6PP77 449 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 Q6ZT83 130 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 BCDIN3DQ7Z5W3 292 aaKnown RBP12.07□□□□□ -0.48
CD44-224ENST00000526669 GABRG1Q8N1C3 465 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 DHRSXQ8N5I4 330 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 BBS1Q8NFJ9 593 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 OR51L1Q8NGJ5 315 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 UBE2FQ969M7 185 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 NMD3Q96D46 503 aaKnown RBP12.07□□□□□ -0.48
CD44-224ENST00000526669 HRASLS5Q96KN8 279 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 RDH12Q96NR8 316 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 SLC38A2Q96QD8 506 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 IL4I1Q96RQ9 567 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 ADI1Q9BV57 179 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 HCAR1Q9BXC0 346 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 NUAK2Q9H093 628 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 HINT3Q9NQE9 182 aaKnown RBP12.07□□□□□ -0.48
CD44-224ENST00000526669 AASSQ9UDR5 926 aa12.07□□□□□ -0.48
CD44-224ENST00000526669 ANKHD1Q8IWZ3 2542 aaKnown RBP12.07□□□□□ -0.48
CD44-224ENST00000526669 A0A096LPE4 126 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 A0A1W2PPZ6 126 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 CIB4A0PJX0 185 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 CENPBD1B2RD01 187 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 PRR23D1E9PI22 279 aaPredicted RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 E9PQ18 207 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 PRR23D2P0DMB1 279 aaPredicted RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 B4GALT1P15291 398 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 MPGP29372 298 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 CD79BP40259 229 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 CDC42P60953 191 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 ARF1P84077 181 aaKnown RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 THEM4Q5T1C6 240 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 C6orf52Q5T4I8 152 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 PLBD1Q6P4A8 553 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 KLHL24Q6TFL4 600 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 CXXC5Q7LFL8 322 aaKnown RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 BHLHA15Q7RTS1 189 aaPredicted RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 ABHD12BQ7Z5M8 362 aaPredicted RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 CPOQ8IVL8 374 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 FAM26EQ8N5C1 309 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 ZNF433Q8N7K0 673 aaPredicted RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 SSC4DQ8WTU2 575 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 ZNRF4Q8WWF5 429 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 SNX18Q96RF0 628 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 DDOQ99489 341 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 PITX2Q99697 317 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 PRRG3Q9BZD7 231 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 OR51V1Q9H2C8 321 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 IMPAD1Q9NX62 359 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 TAS2R16Q9NYV7 291 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 NDRG4Q9ULP0 352 aaKnown RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 B9D1Q9UPM9 204 aa12.06□□□□□ -0.48
CD44-224ENST00000526669 COA3Q9Y2R0 106 aaPredicted RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 UTP20O75691 2785 aaKnown RBP12.06□□□□□ -0.48
CD44-224ENST00000526669 A0A1W2PR80 420 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 RPL36A-HNRNPH2H7BZ11 118 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 TLX2O43763 284 aaPredicted RBP12.05□□□□□ -0.48
CD44-224ENST00000526669 KHDRBS3O75525 346 aaKnown RBP12.05□□□□□ -0.48
CD44-224ENST00000526669 NR2C1P13056 603 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 SPI1P17947 270 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 COX5AP20674 150 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 AGAP20933 346 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 PAICSP22234 425 aaKnown RBP12.05□□□□□ -0.48
CD44-224ENST00000526669 CCKARP32238 428 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 CAPGP40121 348 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 PCYT1AP49585 367 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 ZNF84P51523 738 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 ADARB1P78563 741 aaKnown RBP12.05□□□□□ -0.48
CD44-224ENST00000526669 STK11Q15831 433 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 KLHL12Q53G59 568 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 C10orf128Q5T292 105 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 SFRP5Q5T4F7 317 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 LYPD4Q6UWN0 246 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 STAC2Q6ZMT1 411 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 ZNF813Q6ZN06 617 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 OR6V1Q8N148 313 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 PROKR2Q8NFJ6 384 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 OR1K1Q8NGR3 316 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 TMEM163Q8TC26 289 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 RNASE6Q93091 150 aaKnown RBP12.05□□□□□ -0.48
CD44-224ENST00000526669 FOXB1Q99853 325 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 SEC61A2Q9H9S3 476 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 RASSF1Q9NS23 344 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 ZNF226Q9NYT6 803 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 DNAJC27Q9NZQ0 273 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 UGT2A1Q9Y4X1 527 aa12.05□□□□□ -0.48
CD44-224ENST00000526669 IGLV1-36A0A0B4J1U3 117 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 SH3D21A4FU49 640 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 TVP23AA6NH52 213 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 ZNF99A8MXY4 864 aaPredicted RBP12.04□□□□□ -0.48
CD44-224ENST00000526669 C19orf84I3L1E1 186 aa12.04□□□□□ -0.48
CD44-224ENST00000526669 SLC16A6O15403 523 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms