RNA–Protein interactions for RNA: ENST00000520953.5

SREK1-209, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 5

Gene SREK1, Length 2,172 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-209ENST00000520953 SPI1P17947 270 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 UGT2B10P36537 528 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 SERPINB10P48595 397 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 SELENOPP49908 381 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 C16orf87Q6PH81 154 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 FAM180AQ6UWF9 173 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 LINC00299Q6ZSB3 139 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 BTLAQ7Z6A9 289 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 TEX19Q8NA77 164 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 OR4F15Q8NGB8 312 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 ZMYND19Q96E35 227 aaPredicted RBP13.37□□□□□ -0.27
SREK1-209ENST00000520953 RNFT2Q96EX2 444 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 CNTNAP3BQ96NU0 1288 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 CNTNAP3Q9BZ76 1288 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 PRDM14Q9GZV8 571 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 RNF167Q9H6Y7 350 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 ASF1BQ9NVP2 202 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 SLC22A23A1A5C7 686 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 CLDN25C9JDP6 229 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 XKRYO14609 159 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 DNPH1O43598 174 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 CYTIPO60759 359 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 CTLA4P16410 223 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 DAP3P51398 398 aaKnown RBP13.37□□□□□ -0.27
SREK1-209ENST00000520953 RPS7P62081 194 aaKnown RBP13.37□□□□□ -0.27
SREK1-209ENST00000520953 RASGEF1BQ0VAM2 473 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 INAQ16352 499 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 TSTQ16762 297 aaKnown RBP13.37□□□□□ -0.27
SREK1-209ENST00000520953 EMC4Q5J8M3 183 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 PHYHD1Q5SRE7 291 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 RNF128Q8TEB7 428 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 HTRA1Q92743 480 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 KCNK17Q96T54 332 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 NDEL1Q9GZM8 345 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 PALMDQ9NP74 551 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 TIGARQ9NQ88 270 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 FLVCR1Q9Y5Y0 555 aa13.37□□□□□ -0.27
SREK1-209ENST00000520953 FREM1Q5H8C1 2179 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 LOC100506127A0A0U1RQW1 187 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 LOC102725191A0A1B0GVB3 256 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 CRYABP02511 175 aaKnown RBP13.36□□□□□ -0.27
SREK1-209ENST00000520953 TDGF1P3P51864 188 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 RPS3AP61247 264 aaKnown RBP13.36□□□□□ -0.27
SREK1-209ENST00000520953 SSX1Q16384 188 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 PDSS1Q5T2R2 415 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 MEPCEQ7L2J0 689 aaKnown RBP13.36□□□□□ -0.27
SREK1-209ENST00000520953 ATCAYQ86WG3 371 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 OR6Q1Q8NGQ2 317 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 OPALINQ96PE5 141 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 TEAD3Q99594 435 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 CENPOQ9BU64 300 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 SLC25A18Q9H1K4 315 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 MED12LQ86YW9 2145 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 CFAP46Q8IYW2 2715 aa13.36□□□□□ -0.27
SREK1-209ENST00000520953 MAGEB3O15480 346 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 PGA4P0DJD7 388 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 PGA3P0DJD8 388 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 HTR1FP30939 366 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 HCCSP53701 268 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 TMED1Q13445 227 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 ZNF846Q147U1 533 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 POU4F3Q15319 338 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 LINC01590Q5TEZ4 76 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 USP43Q70EL4 1123 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 MFSD4AQ8N468 514 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 ZNF511Q8NB15 262 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 OR51G2Q8NGK0 314 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 OR6K6Q8NGW6 343 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 CHCHD6Q9BRQ6 235 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 MRPL13Q9BYD1 178 aaKnown RBP13.35□□□□□ -0.27
SREK1-209ENST00000520953 VSX1Q9NZR4 365 aaPredicted RBP13.35□□□□□ -0.27
SREK1-209ENST00000520953 NBASA2RRP1 2371 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 TVP23AA6NH52 213 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 SLC16A7O60669 478 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 SYNGR4O95473 234 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 PSKH1P11801 424 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 PAICSP22234 425 aaKnown RBP13.35□□□□□ -0.27
SREK1-209ENST00000520953 MTNR1AP48039 350 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 TUBA1BP68363 451 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 RNLSQ5VYX0 342 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 C3P1Q6ZMU1 363 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 TUBA1AQ71U36 451 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 ZGRF1Q86YA3 2104 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 TUSC5Q8IXB3 177 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 RPRMLQ8N4K4 120 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 OR52I1Q8NGK6 324 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 OR2M2Q96R28 347 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 TRIB1Q96RU8 372 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 HMG20AQ9NP66 347 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 H2AFY2Q9P0M6 372 aaPredicted RBP13.35□□□□□ -0.27
SREK1-209ENST00000520953 MCTS1Q9ULC4 181 aaKnown RBP13.35□□□□□ -0.27
SREK1-209ENST00000520953 ERGIC3Q9Y282 383 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 CACNA1BQ00975 2339 aa13.35□□□□□ -0.27
SREK1-209ENST00000520953 PHF3Q92576 2039 aaKnown RBP13.35□□□□□ -0.27
SREK1-209ENST00000520953 NPIPB13A6NJU9 1138 aa13.34□□□□□ -0.27
SREK1-209ENST00000520953 NPIPB4C9JG80 1138 aa13.34□□□□□ -0.27
SREK1-209ENST00000520953 CCRL2O00421 344 aa13.34□□□□□ -0.27
SREK1-209ENST00000520953 SELENOFO60613 162 aa13.34□□□□□ -0.27
SREK1-209ENST00000520953 ZNF432O94892 652 aa13.34□□□□□ -0.27
SREK1-209ENST00000520953 VAMP5O95183 116 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms