RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 C1orf100Q5SVJ3 147 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 MARC1Q5VT66 337 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 CTRB2Q6GPI1 263 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 CNIH2Q6PI25 160 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 HSD17B13Q7Z5P4 300 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 TCAIMQ8N3R3 496 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 PRELID2Q8N945 189 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 VN1R2Q8NFZ6 395 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR2AP1Q8NGE2 309 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 LILRB4Q8NHJ6 448 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 PIK3IP1Q96FE7 263 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 MED8Q96G25 268 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 DNAJC1Q96KC8 554 aaKnown RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 SH3GL3Q99963 347 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 PAXXQ9BUH6 204 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 SLC7A5P2Q9GIP4 190 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 POLR2J2Q9GZM3 115 aaKnown RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 POLR2J3Q9H1A7 115 aaKnown RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR2AG1Q9H205 316 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 RETNQ9HD89 108 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 SH2D2AQ9NP31 389 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 DMAP1Q9NPF5 467 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 QPCTLQ9NXS2 382 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 CD274Q9NZQ7 290 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 CHMP5Q9NZZ3 219 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF282Q9UDV7 671 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 UBN2Q6ZU65 1347 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 A0A087WWV3 80 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 A0A0B4J2A0 478 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 CENPXA8MT69 81 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZBTB5O15062 677 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 SCAMP2O15127 329 aaKnown RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 XRCC2O43543 280 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 KRT16P08779 473 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 NR2C1P13056 603 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 FOLR2P14207 255 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 HPGDP15428 266 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF250P15622 560 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 CCNOP22674 350 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 FMO3P31513 532 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 CRISP1P54107 249 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 XIAPP98170 497 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ACVR1Q04771 509 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF763Q0D2J5 394 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 CLINT1Q14677 625 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 NRF1Q16656 503 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 EOGTQ5NDL2 527 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 RNLSQ5VYX0 342 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF772Q68DY9 489 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 CGB2Q6NT52 195 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF620Q6ZNG0 422 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF497Q6ZNH5 498 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 FAM122BQ7Z309 247 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 FAM220AQ7Z4H9 259 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZBED8Q8IZ13 594 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ST13P4Q8IZP2 240 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ARHGAP18Q8N392 663 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 NKAPP1Q8N9T2 125 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF740Q8NDX6 193 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR56A4Q8NGH8 313 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR2L2Q8NH16 312 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF596Q8TC21 504 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 GTSF1Q8WW33 167 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 TMEM54Q969K7 222 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 TMIGD2Q96BF3 282 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 VSIG2Q96IQ7 327 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 C1orf147Q96MC9 270 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 TSG101Q99816 390 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ARHGDIGQ99819 225 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 OSBPL10Q9BXB5 764 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 SLC25A22Q9H936 323 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 AIG1Q9NVV5 245 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 MARCH5Q9NX47 278 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZMAT5Q9UDW3 170 aaKnown RBP2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 SHPKQ9UHJ6 478 aa2.93□□□□□ -1.94
TRAPPC13-208ENST00000505553 TSPAN11A1L157 253 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 A8MUA0 341 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 ERVV-1B6SEH8 477 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 PI15O43692 258 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF354AO60765 605 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF780AO75290 641 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 LSM8O95777 96 aaKnown RBP2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 HBE1P02100 147 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 CALM1P0DP23 149 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 CALM2P0DP24 149 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 CALM3P0DP25 149 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 COX7A1P24310 79 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 AK4P27144 223 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 OR3A4PP47883 348 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 RORCP51449 518 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 TAS2R19P59542 299 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 ZNF45Q02386 682 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 SP4Q02446 784 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 EGFEM1PQ0D2K5 195 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 SLAQ13239 276 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 RCAN2Q14206 197 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 VAMP3Q15836 100 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 CEP85LQ5SZL2 805 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 TMEM150AQ86TG1 271 aa2.92□□□□□ -1.94
TRAPPC13-208ENST00000505553 IQCF2Q8IXL9 164 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms