RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 PM20D2Q8IYS1 436 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 EXD3Q8N9H8 876 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 INTS12Q96CB8 462 aaKnown RBP9.19□□□□□ -0.94
HDAC3-214ENST00000495485 GNRHR2Q96P88 292 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 KLHDC3Q9BQ90 382 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF649Q9BS31 505 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 TTYH2Q9BSA4 534 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 SYT4Q9H2B2 425 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 RERGLQ9H628 205 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 ZFP64Q9NPA5 681 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 GALNT8Q9NY28 637 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 KLHL9Q9P2J3 617 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 GNG8Q9UK08 70 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 B9D1Q9UPM9 204 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 ESPL1Q14674 2120 aa9.19□□□□□ -0.94
HDAC3-214ENST00000495485 TRBV2A0A0J9YWF9 115 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 SLC22A23A1A5C7 686 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 OR5H15A6NDH6 313 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 A6NL46 340 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 AQP7P3A6NL99 342 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 C17orf51A8MQB3 221 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 NPIPA2E9PIF3 369 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 NPIPA3F8WFD2 350 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 OGG1O15527 345 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 ARL6IP5O75915 188 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 AKR7A3O95154 331 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 IFNGR1P15260 489 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 CD46P15529 392 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 EDNRAP25101 427 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 MAPK3P27361 379 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 GDF1P27539 372 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 SFTPDP35247 375 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 CLRN1P58418 232 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 RPS25P62851 125 aaKnown RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 ARG2P78540 354 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF45Q02386 682 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 GTF3C1Q12789 2109 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 LINC01590Q5TEZ4 76 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 SLC18B1Q6NT16 456 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 B3GLCTQ6Y288 498 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 EML6Q6ZMW3 1958 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 Q6ZS92 163 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 ESPNLQ6ZVH7 1005 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 CDC20BQ86Y33 519 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 OR6V1Q8N148 313 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 GHDCQ8N2G8 530 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 YIPF7Q8N8F6 280 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 OR10H5Q8NGA6 315 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 OR51L1Q8NGJ5 315 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 OR6Q1Q8NGQ2 317 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 OR6N2Q8NGY6 317 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 OR6X1Q8NH79 312 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 ASB10Q8WXI3 467 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 TMEM203Q969S6 136 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 SLC25A44Q96H78 314 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 TMED9Q9BVK6 235 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 SF3B5Q9BWJ5 86 aaKnown RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 CDADC1Q9BWV3 514 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 SLIRPQ9GZT3 109 aaKnown RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 C6orf62Q9GZU0 229 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 NXF2Q9GZY0 626 aaKnown RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 COMMD4Q9H0A8 199 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 ISG20L2Q9H9L3 353 aaKnown RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 PAQR5Q9NXK6 330 aaPredicted RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 QPCTLQ9NXS2 382 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 B3GNT3Q9Y2A9 372 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 TP53TG5Q9Y2B4 290 aa9.18□□□□□ -0.94
HDAC3-214ENST00000495485 SF3B6Q9Y3B4 125 aaKnown RBP9.18□□□□□ -0.94
HDAC3-214ENST00000495485 OR2M5A3KFT3 312 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF879B4DU55 563 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 ZNF593O00488 134 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-214ENST00000495485 GABRPO00591 440 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 CASKO14936 926 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 EFNA2O43921 213 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 ZIC3O60481 467 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 SELENOFO60613 162 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 TMEM127O75204 238 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 TRAPPC6AO75865 159 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 AQP8O94778 261 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 CDRT1O95170 752 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 HRGP04196 525 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 CD40LGP29965 261 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 CD96P40200 585 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 DNASE1L1P49184 302 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 MTNR1BP49286 362 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 ENTPD1P49961 510 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 BIDP55957 195 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 OR12D2P58182 307 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 RAC3P60763 192 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 GPR85P60893 370 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 ADAM8P78325 824 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 SPANXN2Q5MJ10 180 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 C22orf42Q6IC83 251 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 ARL9Q6T311 187 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 PCSK4Q6UW60 755 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 TRILQ7L0X0 811 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 MDGA2Q7Z553 956 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 TIGD4Q8IY51 512 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 TMEM178AQ8NBL3 297 aa9.17□□□□□ -0.94
HDAC3-214ENST00000495485 NEIL3Q8TAT5 605 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms