RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	RASD2	Q96D21	266 aa		11.52	□□□□□ -0.57
NR1H3-223	ENST00000486991	MED18	Q9BUE0	208 aa		11.52	□□□□□ -0.57
NR1H3-223	ENST00000486991	TEX12	Q9BXU0	123 aa		11.52	□□□□□ -0.57
NR1H3-223	ENST00000486991	GRIP2	Q9C0E4	1043 aa		11.52	□□□□□ -0.57
NR1H3-223	ENST00000486991	BCO1	Q9HAY6	547 aa		11.52	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC25A19	Q9HC21	320 aa		11.52	□□□□□ -0.57
NR1H3-223	ENST00000486991	FAM118A	Q9NWS6	357 aa		11.52	□□□□□ -0.57
NR1H3-223	ENST00000486991	BAIAP2	Q9UQB8	552 aa		11.52	□□□□□ -0.57
NR1H3-223	ENST00000486991	ALPK2	Q86TB3	2170 aa		11.52	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC35F4	A4IF30	521 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	NPIPB13	A6NJU9	1138 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	NPIPB4	C9JG80	1138 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991		H0YJX3	145 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	IMPA2	O14732	288 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	SMAD7	O15105	426 aa	Known RBP	11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	ARPC3	O15145	178 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	IDH3B	O43837	385 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	APEH	P13798	732 aa	Known RBP	11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	AGTR1	P30556	359 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	SDHA	P31040	664 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	GRK5	P34947	590 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	CAMK2D	Q13557	499 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	KRR1	Q13601	381 aa	Known RBP	11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	ARMC4	Q5T2S8	1044 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLX4IP	Q5VYV7	408 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	BEND4	Q6ZU67	534 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	FAM122B	Q7Z309	247 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	NUFIP2	Q7Z417	695 aa	Known RBP	11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	JAZF1	Q86VZ6	243 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	LNX2	Q8N448	690 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	ARIH2OS	Q8N7S6	290 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZNF610	Q8N9Z0	462 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	ADI1	Q9BV57	179 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	C12orf49	Q9H741	205 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	GP6	Q9HCN6	339 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	BEX4	Q9NWD9	120 aa	Predicted RBP	11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	TVP23B	Q9NYZ1	205 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	GMPPB	Q9Y5P6	360 aa		11.51	□□□□□ -0.57
NR1H3-223	ENST00000486991	FBN3	Q75N90	2809 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	FBN1	P35555	2871 aa	Known RBP	11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	LOC100130705	A0A1B0GUX0	176 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991		A6NIZ1	184 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991		H7C1Q1	480 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	XKRY	O14609	159 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	ARHGEF9	O43307	516 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC43A1	O75387	559 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	MRPL33	O75394	65 aa	Known RBP	11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC2A10	O95528	541 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	TXNDC12	O95881	172 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	HMGN1	P05114	100 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	HIST1H1C	P16403	213 aa	Known RBP	11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	LOX	P28300	417 aa	Predicted RBP	11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	PCSK6	P29122	969 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	GGT2	P36268	569 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	UGT2B10	P36537	528 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	SELENOP	P49908	381 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	RAP1B	P61224	184 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	RAP1A	P62834	184 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	SNAPC1	Q16533	368 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	MEST	Q5EB52	335 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991		Q5PR19	223 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	C6orf52	Q5T4I8	152 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	TTC23	Q5W5X9	447 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	FAM205BP	Q63HN1	556 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	HDDC2	Q7Z4H3	204 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	WDFY1	Q8IWB7	410 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZNF100	Q8IYN0	542 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR52E2	Q8NGJ4	325 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR4K13	Q8NH42	304 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR6X1	Q8NH79	312 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	ZNF519	Q8TB69	540 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	FAM81A	Q8TBF8	368 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	TMEM45B	Q96B21	275 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	PLEKHA8	Q96JA3	519 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	ADAD1	Q96M93	576 aa	Known RBP	11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	WFIKKN1	Q96NZ8	548 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC38A2	Q96QD8	506 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	OR2M2	Q96R28	347 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	MDFI	Q99750	246 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	PRRG3	Q9BZD7	231 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	PARPBP	Q9NWS1	579 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	KLHL21	Q9UJP4	597 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	RCE1	Q9Y256	329 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	USF3	Q68DE3	2245 aa		11.5	□□□□□ -0.57
NR1H3-223	ENST00000486991	TLN2	Q9Y4G6	2542 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	RIIAD1	A6NNX1	92 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	DEFB108A	A8MXU0	73 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991		H7C1C5	153 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991		M0R129	80 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	SURF4	O15260	269 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	SLC16A6	O15403	523 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	TRMU	O75648	421 aa	Known RBP	11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	IFNG	P01579	166 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	IGHG1	P01857	330 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	HEXA	P06865	529 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	ACADS	P16219	412 aa		11.49	□□□□□ -0.57
NR1H3-223	ENST00000486991	EDNRA	P25101	427 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms