RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 SPSB2Q99619 263 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 MICU1Q9BPX6 476 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 POTEKPQ9BYX7 375 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 NKX2-4Q9H2Z4 354 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 PRMT8Q9NR22 394 aaPredicted RBP12.5□□□□□ -0.41
NPHP4-207ENST00000470763 IKZF2Q9UKS7 526 aa12.5□□□□□ -0.41
NPHP4-207ENST00000470763 EFEMP2O95967 443 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 SOD2P04179 222 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 S100A8P05109 93 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 ITGA5P08648 1049 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 ALKBH1Q13686 389 aaKnown RBP12.49□□□□□ -0.41
NPHP4-207ENST00000470763 RAB33AQ14088 237 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 ALG10BQ5I7T1 473 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 NKAPLQ5M9Q1 402 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 TMEM205Q6UW68 189 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 SLC29A4Q7RTT9 530 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 MISPQ8IVT2 679 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 TCEAL8Q8IYN2 117 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 NPEPL1Q8NDH3 523 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 CASTOR1Q8WTX7 329 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 IRF7Q92985 503 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 CCDC74AQ96AQ1 378 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 SEC11CQ9BY50 192 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 ACKR4Q9NPB9 350 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 SLC22A7Q9Y694 548 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 C5orf52A6NGY3 159 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 NDUFB2O95178 105 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 SDHAP31040 664 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 FABP9Q0Z7S8 132 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 IRF4Q15306 451 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 TSC22D1Q15714 1073 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 MLF2Q15773 248 aaPredicted RBP12.49□□□□□ -0.41
NPHP4-207ENST00000470763 VWA2Q5GFL6 755 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 OTPQ5XKR4 325 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 KCTD9Q7L273 389 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 FAM220AQ7Z4H9 259 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF676Q8N7Q3 588 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 C3orf49Q96BT1 292 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 MRM2Q9UI43 246 aaKnown RBP12.49□□□□□ -0.41
NPHP4-207ENST00000470763 A0A0B4J2E0 115 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 A0A1B0GX12 115 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 RNGTTO60942 597 aaKnown RBP12.49□□□□□ -0.41
NPHP4-207ENST00000470763 DNAJB6O75190 326 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF44P15621 663 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 ST6GAL1P15907 406 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 CSRP1P21291 193 aaKnown RBP12.49□□□□□ -0.41
NPHP4-207ENST00000470763 ELAVL1Q15717 326 aaKnown RBP12.49□□□□□ -0.41
NPHP4-207ENST00000470763 RAB30Q15771 203 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 C2orf76Q3KRA6 126 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 MTSS1LQ765P7 747 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 CD163Q86VB7 1156 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 RPS4Y2Q8TD47 263 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF285Q96NJ3 590 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 RXFP3Q9NSD7 469 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 DPP7Q9UHL4 492 aa12.49□□□□□ -0.41
NPHP4-207ENST00000470763 NUP210LQ5VU65 1888 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 C1orf196B1AJZ1 125 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 AGPAT2O15120 278 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 UPK3AO75631 287 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 MUC1P15941 1255 aaPredicted RBP12.48□□□□□ -0.41
NPHP4-207ENST00000470763 ABCD3P28288 659 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 TAS2R19P59542 299 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 DEFB103AP81534 67 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 AIMP2Q13155 320 aaKnown RBP12.48□□□□□ -0.41
NPHP4-207ENST00000470763 CNKSR3Q6P9H4 555 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 SKA3Q8IX90 412 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 OR4S1Q8NGB4 309 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 ARRDC3Q96B67 414 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 PIK3IP1Q96FE7 263 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 CLCC1Q96S66 551 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 NRIP2Q9BQI9 281 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 NAA11Q9BSU3 229 aaPredicted RBP12.48□□□□□ -0.41
NPHP4-207ENST00000470763 ALG12Q9BV10 488 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 OR51M1Q9H341 326 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 SEMA6CQ9H3T2 930 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 MSRAQ9UJ68 235 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 PCOLCE2Q9UKZ9 415 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 HEATR5AQ86XA9 2040 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 CXorf51AA0A1B0GTR3 108 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 TVP23AA6NH52 213 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 EFCAB7A8K855 629 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 ZNF208O43345 1280 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 AGR2O95994 175 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 PCCBP05166 539 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 HSD17B2P37059 387 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 F2RL1P55085 397 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 CEBPEQ15744 281 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 ACER2Q5QJU3 275 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 METRNLQ641Q3 311 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 TMEM200AQ86VY9 491 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 BPIFB2Q8N4F0 458 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 GPX8Q8TED1 209 aa12.48□□□□□ -0.41
NPHP4-207ENST00000470763 ADAD1Q96M93 576 aaKnown RBP12.48□□□□□ -0.41
NPHP4-207ENST00000470763 INSM2Q96T92 566 aaPredicted RBP12.48□□□□□ -0.41
NPHP4-207ENST00000470763 OR52A4PA6NMU1 304 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 VEGFDO43915 354 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 HEXAP06865 529 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 CD79AP11912 226 aa12.47□□□□□ -0.41
NPHP4-207ENST00000470763 APEHP13798 732 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms