RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 TMEM82A0PJX8 343 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 SMAD9O15198 467 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 SRPX2O60687 465 aaPredicted RBP11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 PMS2P2O95744 297 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 CD8AP01732 235 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 CA3P07451 260 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 APEHP13798 732 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 ARHGAP40Q5TG30 622 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 ELP2Q6IA86 826 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 TMED4Q7Z7H5 227 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 GALNT16Q8N428 558 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 STEAP2Q8NFT2 490 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 PATE1Q8WXA2 126 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 ZNF75AQ96N20 296 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 TSPAN32Q96QS1 320 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 TINAGL1Q9GZM7 467 aaPredicted RBP11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 SLC6A15Q9H2J7 730 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 FBXO4Q9UKT5 387 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 CDV3Q9UKY7 258 aaKnown RBP11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 PLCL2Q9UPR0 1127 aa11.76□□□□□ -0.53
PDZRN3-205ENST00000466780 LOC100289279A0A1B0GTE1 492 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 A0A1B0GTI1 187 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 ELOA3DA6NLF2 546 aaPredicted RBP11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 M0QYG6 137 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 SLC17A2O00624 439 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 ABCD4O14678 606 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 PRKNO60260 465 aaPredicted RBP11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 CDC40O60508 579 aaKnown RBP eCLIP11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 RAD1O60671 282 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 TXNDC12O95881 172 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 PPP1CAP62136 330 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 RAB11BQ15907 218 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 ELOA3BQ3SY89 546 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 PDSS1Q5T2R2 415 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 FAM166AQ6J272 317 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 ATG4DQ86TL0 474 aaPredicted RBP11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 BEST3Q8N1M1 668 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 KCNRGQ8N5I3 272 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 BCORP1Q8N888 145 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 ELOA3Q8NG57 546 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 SEH1LQ96EE3 360 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 DCBLD2Q96PD2 775 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 LPAR4Q99677 370 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 ATG5Q9H1Y0 275 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 IGFLR1Q9H665 355 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 MMP25Q9NPA2 562 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 TAS2R3Q9NYW6 316 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 C2orf16Q68DN1 1984 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 A0A0D9SG52 128 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 OR2W5A6NFC9 320 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 C5orf67F2Z3F1 127 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 POU2F2P09086 479 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 ASAH2BP0C7U1 165 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 LUMP51884 338 aaPredicted RBP11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 MC2RQ01718 297 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 EGR4Q05215 589 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 EGR3Q06889 387 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 PABPC1L2AQ5JQF8 200 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 SFTPA2Q8IWL1 248 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 OR1J2Q8NGS2 313 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 TSEN15Q8WW01 171 aaKnown RBP11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 LIPHQ8WWY8 451 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 PPP1R14AQ96A00 147 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 LMF1Q96S06 567 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 TMEM185BQ9H7F4 350 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 SFXN1Q9H9B4 322 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 Q9N2J8 555 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 KCNG2Q9UJ96 466 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 FANCMQ8IYD8 2048 aa11.75□□□□□ -0.53
PDZRN3-205ENST00000466780 OR5H14A6NHG9 310 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 PCP4L1A6NKN8 68 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 ALOX12BO75342 701 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 RAB3DO95716 219 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 CCKBRP32239 447 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 SSBP1Q04837 148 aaKnown RBP11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 RPL18Q07020 188 aaKnown RBP11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 RASGEF1BQ0VAM2 473 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 CD226Q15762 336 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 ATPAF1Q5TC12 328 aaPredicted RBP11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 TMEM205Q6UW68 189 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 OR5M8Q8NGP6 311 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 CCDC107Q8WV48 283 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 FAM131CQ96AQ9 280 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 KLHDC3Q9BQ90 382 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 G6PC3Q9BUM1 346 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 PLA2G2FQ9BZM2 168 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 NKX6-2Q9C056 277 aaPredicted RBP11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 GDE1Q9NZC3 331 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 TNFSF18Q9UNG2 199 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 SLC22A13Q9Y226 551 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 APODP05090 189 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 ZNF735P0CB33 412 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 CNR1P21554 472 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 AGTR1P30556 359 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 PSMD4P55036 377 aaKnown RBP11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 TAS2R19P59542 299 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 NFATC4Q14934 902 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 EEF1A1P5Q5VTE0 462 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 GLT8D1Q68CQ7 371 aa11.74□□□□□ -0.53
PDZRN3-205ENST00000466780 FAM109BQ6ICB4 259 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms