RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 ACKR1Q16570 336 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 BTLAQ7Z6A9 289 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 ZNF679Q8IYX0 411 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 AMER3Q8N944 861 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 OR13C5Q8NGS8 318 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 MIB2Q96AX9 1013 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 SULT4A1Q9BR01 284 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 FKRPQ9H9S5 495 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 CHRNA9Q9UGM1 479 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 SIT1Q9Y3P8 196 aa13.51□□□□□ -0.25
PTPRU-205ENST00000460170 POLR2AP24928 1970 aaKnown RBP13.51□□□□□ -0.25
PTPRU-205ENST00000460170 TRBV5-3A0A0A0MS03 114 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 MRPL33O75394 65 aaKnown RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 BLVRBP30043 206 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 OR10A3P58181 314 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 VWA2Q5GFL6 755 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 TP53I13Q8NBR0 393 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 PAQR8Q8TEZ7 354 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 GPATCH2Q9NW75 528 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 CGGBP1Q9UFW8 167 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 PISDQ9UG56 409 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 ZNF346Q9UL40 294 aaKnown RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 A0A1W2PPC4 97 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 PRKACBP22694 351 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 APOBEC1P41238 236 aaKnown RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 KIRREL2Q6UWL6 708 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 PCNPQ8WW12 178 aaKnown RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 G3V3Y1 287 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 AIPO00170 330 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 POU3F3P20264 500 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 EMDP50402 254 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 YOD1Q5VVQ6 348 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 PTCRAQ6ISU1 281 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 LIX1LQ8IVB5 337 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 TSSK2Q96PF2 358 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 GLTPQ9NZD2 209 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 PCBP3P57721 371 aaKnown RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 TAS2R20P59543 309 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 HTRA4P83105 476 aaPredicted RBP13.5□□□□□ -0.25
PTPRU-205ENST00000460170 GPR157Q5UAW9 335 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 HEPHL1Q6MZM0 1159 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 PGAP1Q75T13 922 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 CLEC1AQ8NC01 280 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 TSLPQ969D9 159 aa13.5□□□□□ -0.25
PTPRU-205ENST00000460170 AKR7A3O95154 331 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 PMS2P2O95744 297 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 ACHEP22303 614 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 TUBG1P23258 451 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 NPSR1Q6W5P4 371 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 BPNT1O95861 308 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 PCMT1P22061 227 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 CDK5Q00535 292 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 TGFBR3Q03167 851 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 OR1S1Q8NH92 325 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 MVB12AQ96EY5 273 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 TSPAN10Q9H1Z9 355 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-205ENST00000460170 POMT2Q9UKY4 750 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 TMEM184BQ9Y519 407 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-205ENST00000460170 NUPL2O15504 423 aaKnown RBP13.49□□□□□ -0.25
PTPRU-205ENST00000460170 OR7C1O76099 320 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-205ENST00000460170 SOD1P00441 154 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 EIF4EP06730 217 aaKnown RBP13.49□□□□□ -0.25
PTPRU-205ENST00000460170 S100A11P31949 105 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 FOXK1P85037 733 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 LILRB2Q8N423 598 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 OR51S1Q8NGJ8 323 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 ZNF286AQ9HBT8 521 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 SMCO3A2RU48 225 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 IFITM5A6NNB3 132 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 PRKNO60260 465 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-205ENST00000460170 IGHA2P01877 340 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 EPHA1P21709 976 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 MC2RQ01718 297 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 KRBOX4Q5JUW0 171 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 OR2L13Q8N349 312 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 PRR18Q8N4B5 295 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 OR4Q3Q8NH05 313 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 SLC25A43Q8WUT9 341 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-205ENST00000460170 DCLRE1CQ96SD1 692 aaKnown RBP13.49□□□□□ -0.25
PTPRU-205ENST00000460170 SMIM3Q9BZL3 60 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 SEMA4CQ9C0C4 833 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 SLAMF7Q9NQ25 335 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 ACAD8Q9UKU7 415 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 DDAH2O95865 285 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 RNF128Q8TEB7 428 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 MBD1Q9UIS9 605 aaPredicted RBP13.49□□□□□ -0.25
PTPRU-205ENST00000460170 PCDHGA1Q9Y5H4 931 aa13.49□□□□□ -0.25
PTPRU-205ENST00000460170 IDSB3KWA1 339 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 IGHEP01854 428 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 PMPCAQ10713 525 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 CTRCQ99895 268 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 EMC6Q9BV81 110 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 SAV1Q9H4B6 383 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-205ENST00000460170 WSB2Q9NYS7 404 aaPredicted RBP13.48□□□□□ -0.25
PTPRU-205ENST00000460170 ANKRD61A6NGH8 418 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 A6NL46 340 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 LINC01565O15544 149 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 ICOSLGO75144 302 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 ZNF44P15621 663 aa13.48□□□□□ -0.25
PTPRU-205ENST00000460170 CPT2P23786 658 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms