RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 RANBP3LQ86VV4 465 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 BCL6BQ8N143 479 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 CPEB3Q8NE35 698 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 OR9I1Q8NGQ6 314 aa15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 SLC25A28Q96A46 364 aa15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 SLC25A44Q96H78 314 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 RSPO3Q9BXY4 272 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 EGLN1Q9GZT9 426 aa15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 MS4A7Q9GZW8 240 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 KCNN2Q9H2S1 579 aa15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 EIF3KQ9UBQ5 218 aaKnown RBP15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 LEF1Q9UJU2 399 aaPredicted RBP15.28■□□□□ 0.04
CHCHD3-203ENST00000448878 A0A0B4J2E0 115 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 A0A1B0GX12 115 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 POM121CA8CG34 1229 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 SNAP29O95721 258 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 MT-ATP6P00846 226 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 IGHV3-13P01766 116 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 HIST1H2ABP04908 130 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 ZNF84P51523 738 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 CDK6Q00534 326 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 FAM209AQ5JX71 171 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 THEM4Q5T1C6 240 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 GCNT6Q5T4J0 391 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 HHATQ5VTY9 493 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 REEP3Q6NUK4 255 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 MSANTD1Q6ZTZ1 278 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 HIST3H2AQ7L7L0 130 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 DPPA2Q7Z7J5 298 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 ANKRD42Q8N9B4 389 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 HIPK4Q8NE63 616 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 HIST1H2ACQ93077 130 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 TMEM43Q9BTV4 400 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 MRI1Q9BV20 369 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 PAIP1Q9H074 479 aaKnown RBP15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 ZMAT3Q9HA38 289 aaKnown RBP15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 TCF7L2Q9NQB0 619 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 MMP26Q9NRE1 261 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 PLEK2Q9NYT0 353 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 ZIM2Q9NZV7 527 aa15.27■□□□□ 0.04
CHCHD3-203ENST00000448878 ARHGAP32A7KAX9 2087 aa15.27■□□□□ 0.03
CHCHD3-203ENST00000448878 TGP01266 2768 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 PRORSD1PA6NEY8 169 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 UBDO15205 165 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 CH25HO95992 272 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 UMPSP11172 480 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 AQP1P29972 269 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 PCGF2P35227 344 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 VSNL1P62760 191 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 GOLGA6L1Q8N7Z2 621 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 GTF2H4Q92759 462 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 ZNF607Q96SK3 696 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 MCHR1Q99705 422 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 CCNB1IP1Q9NPC3 277 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 EGFL7Q9UHF1 273 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 PURGQ9UJV8 347 aaKnown RBP15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 WNK2Q9Y3S1 2297 aa15.26■□□□□ 0.03
CHCHD3-203ENST00000448878 A0A0G2JK05 382 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 KPNA4O00629 521 aaPredicted RBP15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 UBOX5O94941 541 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 GPANK1O95872 356 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 BMP2P12643 396 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 OMGP23515 440 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 MPV17P39210 176 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 ZNF154Q13106 437 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 HNRNPA0Q13151 305 aaKnown RBP15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 MPP2Q14168 576 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 LEG1Q6P5S2 330 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 TTC33Q6PID6 262 aaPredicted RBP15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 SYT14Q8NB59 555 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 DEFB108BQ8NET1 73 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 IPCEF1Q8WWN9 437 aaPredicted RBP15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 GEMIN6Q8WXD5 167 aaKnown RBP15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 TRIM44Q96DX7 344 aaPredicted RBP15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 WFDC6Q9BQY6 131 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 SSU72Q9NP77 194 aaKnown RBP15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 NANSQ9NR45 359 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 TAS2R5Q9NYW4 299 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 NPTNQ9Y639 398 aa15.25■□□□□ 0.03
CHCHD3-203ENST00000448878 C5orf49A4QMS7 147 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 TPST2O60704 377 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 SERPINB7O75635 380 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 MFN2O95140 757 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 IGHG1P01857 330 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 PGA4P0DJD7 388 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 PGA3P0DJD8 388 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 MDKP21741 143 aaPredicted RBP15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 SLC6A2P23975 617 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 STOMP27105 288 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 SCARB2Q14108 478 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 PABPC1L2AQ5JQF8 200 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 UNQ6126/PRO20091Q6UXV3 157 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 JAZF1Q86VZ6 243 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 ARMC8Q8IUR7 673 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 KLHL36Q8N4N3 616 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 SMYD1Q8NB12 490 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 SLC25A40Q8TBP6 338 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 MCHR2Q969V1 340 aa15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 C1orf147Q96MC9 270 aaPredicted RBP15.24■□□□□ 0.03
CHCHD3-203ENST00000448878 ZNF48Q96MX3 618 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms