RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 OR52N1Q8NH53 320 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 RHEBL1Q8TAI7 183 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 SFT2D1Q8WV19 159 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 RFT1Q96AA3 541 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ISG20Q96AZ6 181 aaKnown RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 UPRTQ96BW1 309 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ULK4Q96C45 1275 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF501Q96CX3 271 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 PYURFQ96I23 114 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZBED3Q96IU2 234 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 LINC00052Q96N35 136 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 TSSK2Q96PF2 358 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CSPG4P5Q96PW8 444 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 F2RL3Q96RI0 385 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 SDHCQ99643 169 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 LPAR4Q99677 370 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 MGLLQ99685 303 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 MAPKAP1Q9BPZ7 522 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM175Q9BSA9 504 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM43Q9BTV4 400 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 GSDMCQ9BYG8 508 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 NLNQ9BYT8 704 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 HDHD2Q9H0R4 259 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 POLR3FQ9H1D9 316 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR51E2Q9H255 320 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR51J1Q9H342 316 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 UBQLN3Q9H347 655 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ASB7Q9H672 318 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 XKR8Q9H6D3 395 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 C11orf49Q9H6J7 331 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 PRMT8Q9NR22 394 aaPredicted RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 DCAF13Q9NV06 445 aaKnown RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 C1orf109Q9NX04 203 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 COA4Q9NYJ1 87 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 CTSFQ9UBX1 484 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 SEC14L3Q9UDX4 400 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 IL36AQ9UHA7 158 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 POMT2Q9UKY4 750 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 UBQLN1Q9UMX0 589 aaKnown RBP3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 GPR132Q9UNW8 380 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ENTPD4Q9Y227 616 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC6A5Q9Y345 797 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 STYXL1Q9Y6J8 313 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 ANKRD12Q6UB98 2062 aa3.86□□□□□ -1.79
HMGB1P16-201ENST00000447155 GREB1Q4ZG55 1949 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ALPK3Q96L96 1907 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAB19A4D1S5 217 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ARRDC5A6NEK1 342 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF879B4DU55 563 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SUPT3HB4E1H0 165 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 DISC1C4P0D8 188 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 K7ERI5 159 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 WWP2O00308 870 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 E2F3O00716 465 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 IMPA2O14732 288 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 NUPL2O15504 423 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 LCMT2O60294 686 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 EIF1BO60739 113 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 KERAO60938 352 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SDC3O75056 442 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZNF682O95780 498 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PGK1P00558 417 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 VTNP04004 478 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SP1P08047 785 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 GIPP09681 153 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PATE4P0C8F1 98 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SP9P0CG40 484 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 HPGDP15428 266 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SPI1P17947 270 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PPIBP23284 216 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 EIF1P41567 113 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ASMTP46597 345 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 OR3A1P47881 315 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 IDH2P48735 452 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 AP3S2P59780 193 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 RAB2AP61019 212 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 RPS8P62241 208 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 DEFA5Q01523 94 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 DHODHQ02127 395 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 TRAM2Q15035 370 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PAFAH1B3Q15102 231 aaKnown RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ZMYND11Q15326 602 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 EXT1Q16394 746 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 TMEM44Q2T9K0 475 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 HFEQ30201 348 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 XKR7Q5GH72 579 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 FFAR4Q5NUL3 377 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 GPRC6AQ5T6X5 926 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 BCL2L15Q5TBC7 163 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC22A10Q63ZE4 541 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 RPL13AP3Q6NVV1 102 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 FAHD1Q6P587 224 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SLC39A4Q6P5W5 647 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PODNL1Q6PEZ8 512 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PSRC1Q6PGN9 363 aaPredicted RBP3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 ENPP6Q6UWR7 440 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 WASH2PQ6VEQ5 465 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 GCNT7Q6ZNI0 430 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 SSX9Q7RTT3 188 aa3.85□□□□□ -1.79
HMGB1P16-201ENST00000447155 PID1Q7Z2X4 250 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms