RNA–Protein interactions for RNA: ENST00000436289.6

NELFE-204, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-204ENST00000436289 HLA-DOBP13765 273 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 S100A3P33764 101 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 APLNRP35414 380 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 LOXL3P58215 753 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 PROK1P58294 105 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 KRTAP10-3P60369 221 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 BTG1P62324 171 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 ZER1Q7Z7L7 766 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 SERPINA11Q86U17 422 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 ZNF283Q8N7M2 679 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 LSMEM1Q8N8F7 131 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 FGFBP3Q8TAT2 258 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 TBC1D15Q8TC07 691 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 AGR3Q8TD06 166 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 SSMEM1Q8WWF3 244 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 RAB40AQ8WXH6 277 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 PLEKHA8Q96JA3 519 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 PANX1Q96RD7 426 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 CHIAQ9BZP6 476 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 SLC6A13Q9NSD5 602 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 TMEM38BQ9NVV0 291 aa12.6□□□□□ -0.39
NELFE-204ENST00000436289 MRPL39Q9NYK5 338 aaKnown RBP12.6□□□□□ -0.39
NELFE-204ENST00000436289 TRAV40A0A0B4J280 105 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 A0A0G2JPF8 293 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 TMEM247A6NEH6 219 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 HNRNPCL2B2RXH8 293 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 HNRNPCL3B7ZW38 293 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 HNRNPCL1O60812 293 aaKnown RBP12.59□□□□□ -0.39
NELFE-204ENST00000436289 HPRP00739 348 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 HNRNPCL4P0DMR1 293 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 KRT4P19013 534 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 TNFSF4P23510 183 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 MDH2P40926 338 aaKnown RBP12.59□□□□□ -0.39
NELFE-204ENST00000436289 PAX2Q02962 417 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 GLO1Q04760 184 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 GPR157Q5UAW9 335 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 ZNF621Q6ZSS3 439 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 SLC16A14Q7RTX9 510 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 LSRQ86X29 649 aaPredicted RBP12.59□□□□□ -0.39
NELFE-204ENST00000436289 RBM15BQ8NDT2 890 aaKnown RBP12.59□□□□□ -0.39
NELFE-204ENST00000436289 OR6X1Q8NH79 312 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 TMEM54Q969K7 222 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 MARS2Q96GW9 593 aaKnown RBP12.59□□□□□ -0.39
NELFE-204ENST00000436289 SAMD8Q96LT4 415 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 SSBP3Q9BWW4 388 aaPredicted RBP12.59□□□□□ -0.39
NELFE-204ENST00000436289 KIF17Q9P2E2 1029 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 KLHL14Q9P2G3 628 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 TENM3Q9P273 2699 aa12.59□□□□□ -0.39
NELFE-204ENST00000436289 IGHV3OR16-10A0A075B7F0 116 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 KIR2DS1A0A191URI9 304 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 IFNL4K9M1U5 179 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 WNT2P09544 360 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 AHCYP23526 432 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 ALDH3A1P30838 453 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 SEC61A1P61619 476 aaKnown RBP12.58□□□□□ -0.4
NELFE-204ENST00000436289 TNFAIP6P98066 277 aaPredicted RBP12.58□□□□□ -0.4
NELFE-204ENST00000436289 FAM189A2Q15884 450 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 TTMPQ5BVD1 217 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 SPANXN4Q5MJ08 99 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 THEM4Q5T1C6 240 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 FAM91A1Q658Y4 838 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 ULK3Q6PHR2 472 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 JAZF1Q86VZ6 243 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 BHLHE22Q8NFJ8 381 aaPredicted RBP12.58□□□□□ -0.4
NELFE-204ENST00000436289 KLF14Q8TD94 323 aaPredicted RBP12.58□□□□□ -0.4
NELFE-204ENST00000436289 SLC47A1Q96FL8 570 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 MAGEB18Q96M61 343 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 SH3GL3Q99963 347 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 KCNN2Q9H2S1 579 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 MARCH7Q9H992 704 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 SELENONQ9NZV5 590 aa12.58□□□□□ -0.4
NELFE-204ENST00000436289 SOX21Q9Y651 276 aaPredicted RBP12.58□□□□□ -0.4
NELFE-204ENST00000436289 RYR3Q15413 4870 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 IGHV2-70DA0A0C4DH43 119 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 MDFIC2A0A1B0GVS7 189 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 ZSCAN5BA6NJL1 495 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 E9PBE3 544 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 G3V4G9 280 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 PLPP3O14495 311 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 SURF4O15260 269 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 DHHO43323 396 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 ZNF500O60304 480 aaPredicted RBP12.57□□□□□ -0.4
NELFE-204ENST00000436289 OPN1MWP04001 364 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 OPN1MW2P0DN77 364 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 OPN1MW3P0DN78 364 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 MAPK11Q15759 364 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 ALG10BQ5I7T1 473 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 SAMD5Q5TGI4 173 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 POU5F2Q8N7G0 328 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 HIPK4Q8NE63 616 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 OR4K5Q8NGD3 323 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 VANGL1Q8TAA9 524 aaPredicted RBP12.57□□□□□ -0.4
NELFE-204ENST00000436289 MRAPQ8TCY5 172 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 SLC38A5Q8WUX1 472 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 ZNF566Q969W8 418 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 SLC25A44Q96H78 314 aaPredicted RBP12.57□□□□□ -0.4
NELFE-204ENST00000436289 TNFRSF19Q9NS68 423 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 MIOXQ9UGB7 285 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 CHST2Q9Y4C5 530 aa12.57□□□□□ -0.4
NELFE-204ENST00000436289 OR6A2O95222 327 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms