RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ADAM21Q9UKJ8 722 aa17.6■□□□□ 0.41
GTF3A-202ENST00000419181 TRBV4-1A0A0J9YWV2 114 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 FARS2O95363 451 aaKnown RBP17.59■□□□□ 0.41
GTF3A-202ENST00000419181 SLC2A10O95528 541 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 RAB36O95755 333 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 BMP4P12644 408 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 NR2C1P13056 603 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 SERPINF1P36955 418 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 LIMS1P48059 325 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 ZNF84P51523 738 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 TNK1Q13470 666 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 FAM205BPQ63HN1 556 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 ZNF519Q8TB69 540 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 FBXO17Q96EF6 278 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 FAM46AQ96IP4 442 aaKnown RBP17.59■□□□□ 0.41
GTF3A-202ENST00000419181 TSPAN32Q96QS1 320 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 SH3GL3Q99963 347 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 FUZQ9BT04 418 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 ALG12Q9BV10 488 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 FBXL3Q9UKT7 428 aa17.59■□□□□ 0.41
GTF3A-202ENST00000419181 ZNF346Q9UL40 294 aaKnown RBP17.59■□□□□ 0.41
GTF3A-202ENST00000419181 CSPG4Q6UVK1 2322 aa17.58■□□□□ 0.41
GTF3A-202ENST00000419181 IGKV1D-43A0A0B4J1Z2 117 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 OR4A8P0C604 315 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 PATE4P0C8F1 98 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 T-ENOLP0DO92 83 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 ZNF26P17031 533 aaPredicted RBP17.58■□□□□ 0.4
GTF3A-202ENST00000419181 CALB2P22676 271 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 FMODQ06828 376 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 CD47Q08722 323 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 SEC23BQ15437 767 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 EFNB3Q15768 340 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 ZBED5Q49AG3 693 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 VHLLQ6RSH7 139 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 CLEC9AQ6UXN8 241 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 Q71RC1 249 aaPredicted RBP17.58■□□□□ 0.4
GTF3A-202ENST00000419181 DPPA2Q7Z7J5 298 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 ZNF584Q8IVC4 421 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 UGT2A1Q9Y4X1 527 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 PMF1-BGLAPU3KQ54 211 aa17.58■□□□□ 0.4
GTF3A-202ENST00000419181 NIPBLQ6KC79 2804 aaeCLIP17.58■□□□□ 0.4
GTF3A-202ENST00000419181 B9A039 149 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 SMAD7O15105 426 aaKnown RBP17.57■□□□□ 0.4
GTF3A-202ENST00000419181 SERPINA5P05154 406 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 ZNF35P13682 527 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 THBS4P35443 961 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 OMPP47874 163 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 MRPS34P82930 218 aaKnown RBP17.57■□□□□ 0.4
GTF3A-202ENST00000419181 RAB35Q15286 201 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 SLC25A47Q6Q0C1 308 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 ARHGAP24Q8N264 748 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 CLDN22Q8N7P3 220 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 ARIH2OSQ8N7S6 290 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 OR52J3Q8NH60 311 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 MCUR1Q96AQ8 359 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 ACTR3BQ9P1U1 418 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 SIGLEC7Q9Y286 467 aa17.57■□□□□ 0.4
GTF3A-202ENST00000419181 SH3PXD2BA1X283 911 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 A6NIZ1 184 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 FAM171A2A8MVW0 826 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 SSX4O60224 188 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 MGRN1O60291 552 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 FABP3P05413 133 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 NR4A1P22736 598 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 NUDT6P53370 316 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 SMIM11AP58511 58 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 RAP1BP61224 184 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 SNRPD2P62316 118 aaKnown RBP17.56■□□□□ 0.4
GTF3A-202ENST00000419181 RAP1AP62834 184 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 ERVK-25P63136 954 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 SNTB2Q13425 540 aaKnown RBP17.56■□□□□ 0.4
GTF3A-202ENST00000419181 DAG1Q14118 895 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 RAB39AQ14964 217 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 SLC36A2Q495M3 483 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 THEM4Q5T1C6 240 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 KRT80Q6KB66 452 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 RINLQ6ZS11 566 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 SLC16A14Q7RTX9 510 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 FNDC8Q8TC99 324 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 NABP1Q96AH0 204 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 PLK3Q9H4B4 646 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 SIAEQ9HAT2 523 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 IL1RAPQ9NPH3 570 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 ADAM18Q9Y3Q7 739 aa17.56■□□□□ 0.4
GTF3A-202ENST00000419181 PTP4A3O75365 173 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 GADD45GO95257 159 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 CD14P08571 375 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 NPR2P20594 1047 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 ATP6V1B2P21281 511 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 CDAP32320 146 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 RPL4P36578 427 aaKnown RBP17.55■□□□□ 0.4
GTF3A-202ENST00000419181 SPIBQ01892 262 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 CYP2R1Q6VVX0 501 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 FAM122BQ7Z309 247 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 NSMAFQ92636 917 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 POM121Q96HA1 1249 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 RSRC1Q96IZ7 334 aaKnown RBP17.55■□□□□ 0.4
GTF3A-202ENST00000419181 RBP7Q96R05 134 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 NDEL1Q9GZM8 345 aa17.55■□□□□ 0.4
GTF3A-202ENST00000419181 KRCC1Q9NPI7 259 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms