RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 SRMP19623 302 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 CD9P21926 228 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 HMGB2P26583 209 aaKnown RBP2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 BMI1P35226 326 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 HSD17B2P37059 387 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 NAMPTP43490 491 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 GPM6AP51674 278 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 CDH6P55285 790 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 KLRC3Q07444 240 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 DNAJC3Q13217 504 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 IL18Q14116 193 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 GANABQ14697 944 aaKnown RBP2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 CYTH1Q15438 398 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 MRPL23Q16540 153 aaKnown RBP2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 GUCA2BQ16661 112 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 DUSP7Q16829 419 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 TMEM183BQ1AE95 376 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 KLHL40Q2TBA0 621 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 RFX4Q33E94 735 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 FBXO48Q5FWF7 155 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 MARCH8Q5T0T0 291 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 LRRC31Q6UY01 552 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 HSDL2Q6YN16 418 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 THOC6Q86W42 341 aaKnown RBP2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 TRIM69Q86WT6 500 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 TMEM183AQ8IXX5 376 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 COMMD1Q8N668 190 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 LILRB4Q8NHJ6 448 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 TOP1MTQ969P6 601 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 IFT74Q96LB3 600 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 RPRD1AQ96P16 312 aaPredicted RBP2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 HAUS4Q9H6D7 363 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 REEP4Q9H6H4 257 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 ZNF226Q9NYT6 803 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 OPN4Q9UHM6 478 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 RPH3ALQ9UNE2 315 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 COMMD3-BMI1R4GMX3 469 aa2.42□□□□□ -2.02
HMGB1P49-201ENST00000418882 EIF4G1Q04637 1599 aaKnown RBP2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 PPIAL4EA0A075B759 164 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 PLAC8L1A1L4L8 177 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 GOLGA8TH3BQL2 631 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 PRKAB2O43741 272 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 RAMP3O60896 148 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 AP2A1O95782 977 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 PPIAL4FP0DN26 164 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 CASP14P31944 242 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 DUSP3P51452 185 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 FGF8P55075 233 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 PLP1P60201 277 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 BST2Q10589 180 aaKnown RBP2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 OXA1LQ15070 435 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 TGFBIQ15582 683 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 NKAIN1Q4KMZ8 207 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 RAET1LQ5VY80 246 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 LCN12Q6JVE5 192 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 TMEM53Q6P2H8 277 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 TMEM107Q6UX40 140 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 LYPD2Q6UXB3 125 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 C19orf35Q6ZS72 473 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 CSGALNACT2Q8N6G5 542 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 PQLC3Q8N755 202 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 OR52H1Q8NGJ2 320 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 ACOT11Q8WXI4 607 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 MCUR1Q96AQ8 359 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 FOPNLQ96NB1 174 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 COPS8Q99627 209 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 TUBGCP2Q9BSJ2 902 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 ANKRD60Q9BZ19 345 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 STMN4Q9H169 189 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 OR2AG1Q9H205 316 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 FBXO44Q9H4M3 255 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 TDRD3Q9H7E2 651 aaKnown RBP2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 SLCO1B3Q9NPD5 702 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 AGPAT3Q9NRZ7 376 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 KLHL28Q9NXS3 571 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 SLC2A8Q9NY64 477 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 PEF1Q9UBV8 284 aaKnown RBP2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 COPS3Q9UNS2 423 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 F11RQ9Y624 299 aaKnown RBP2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 GAKO14976 1311 aa2.41□□□□□ -2.02
HMGB1P49-201ENST00000418882 KANK1Q14678 1352 aa2.4□□□□□ -2.02
HMGB1P49-201ENST00000418882 IGLV3-22A0A075B6J6 115 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 TCRBV9S1A1TA0A576 114 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 PCP4L1A6NKN8 68 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 GOLGA8SH3BPF8 625 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 HSD17B6O14756 317 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 ANGPTL7O43827 346 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 WBP4O75554 376 aaKnown RBP2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 ATP5LO75964 103 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 OR2F2O95006 317 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 DIRAS1O95057 198 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 FTH1P02794 183 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 CD5P06127 495 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 CLTAP09496 248 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 TLX1NBP0CAT3 122 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 ABOP16442 354 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 CNR1P21554 472 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 MERTKQ12866 999 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 KLRB1Q12918 225 aa2.4□□□□□ -2.03
HMGB1P49-201ENST00000418882 PDIA2Q13087 525 aaKnown RBP2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms