RNA–Protein interactions for RNA: ENST00000407089.2

SPTLC1P2-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 2, humanhuman

BASIC

Gene SPTLC1P2, Length 121 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P2-201ENST00000407089 OR2Z1Q8NG97 314 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 OR7A2PQ8NGA2 310 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 OR5R1Q8NH85 324 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 OR5AK3PQ8NH89 298 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CLHC1Q8NHS4 586 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 SFXN5Q8TD22 340 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 NPRL2Q8WTW4 380 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ITLN1Q8WWA0 313 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 MOAP1Q96BY2 351 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 MRRFQ96E11 262 aaKnown RBP4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 MTERF3Q96E29 417 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 TXNDC15Q96J42 360 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CLPTM1LQ96KA5 538 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 FCRL1Q96LA6 429 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 PTDSS2Q9BVG9 487 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ULBP2Q9BZM5 246 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 TRIM31Q9BZY9 425 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 OR2J1Q9GZK6 312 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 MRPL46Q9H2W6 279 aaKnown RBP4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 RANBP3Q9H6Z4 567 aaPredicted RBP4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 GCM1Q9NP62 436 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 RRAGDQ9NQL2 400 aaPredicted RBP4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 POLE3Q9NRF9 147 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 SERTAD4Q9NUC0 356 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CGGBP1Q9UFW8 167 aaPredicted RBP4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 IL19Q9UHD0 177 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ATP6V1HQ9UI12 483 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CAB39Q9Y376 341 aaPredicted RBP4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 WDR45Q9Y484 360 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 FRAS1Q86XX4 4008 aa4.36□□□□□ -1.71
SPTLC1P2-201ENST00000407089 NUP214P35658 2090 aaPredicted RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 IQCMA0A1B0GVH7 501 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 A0A1W2PRX2 142 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 MEGF11A6BM72 1044 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 IFNL4K9M1U5 179 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 EIF3HO15372 352 aaKnown RBP eCLIP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 FZD7O75084 574 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 AHSA1O95433 338 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 FSTL3O95633 263 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 C6orf47O95873 294 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CYB5R3P00387 301 aaPredicted RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 HPRP00739 348 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 IFNW1P05000 195 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 HLA-DOBP13765 273 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 SNRPBP14678 240 aaKnown RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ZNF26P17031 533 aaPredicted RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CCNOP22674 350 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 PRPH2P23942 346 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 MAPK1P28482 360 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 GTF2E2P29084 291 aaKnown RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 APLNRP35414 380 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 PSMB10P40306 273 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ACAA2P42765 397 aaKnown RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CRATP43155 626 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 RPS5P46782 204 aaKnown RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ZNF75DP51815 510 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ARF6P62330 175 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CD83Q01151 205 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 PLP2Q04941 152 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 EGR4Q05215 589 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 PSG7Q13046 419 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 SMU1Q2TAY7 513 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 LSM12Q3MHD2 195 aaKnown RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 FAM201AQ5SY85 155 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CD276Q5ZPR3 534 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ATG16L1Q676U5 607 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CRIP3Q6Q6R5 217 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 WDR88Q6ZMY6 472 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 COMTD1Q86VU5 262 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CLEC4FQ8N1N0 589 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 MIER2Q8N344 545 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 SCAIQ8N9R8 606 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 PNLDC1Q8NA58 520 aaKnown RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 VPS37AQ8NEZ2 397 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 OR6N1Q8NGY5 312 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 VANGL1Q8TAA9 524 aaPredicted RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ZNF420Q8TAQ5 688 aaPredicted RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 STK35Q8TDR2 534 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 XAGE5Q8WWM1 108 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 NSMAFQ92636 917 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 DPF1Q92782 380 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ROPN1LQ96C74 230 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 RCHY1Q96PM5 261 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 TMEM237Q96Q45 408 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 CCT7Q99832 543 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 OR51I1Q9H343 314 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 MID1IP1Q9NPA3 183 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 C1orf109Q9NX04 203 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 SLC17A7Q9P2U7 560 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 EIF3KQ9UBQ5 218 aaKnown RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 PRDM4Q9UKN5 801 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 STK38LQ9Y2H1 464 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 SNX24Q9Y343 169 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 JRKLQ9Y4A0 524 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 MAB21L2Q9Y586 359 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 STARD9Q9P2P6 4700 aa4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 HUWE1Q7Z6Z7 4374 aaKnown RBP4.35□□□□□ -1.71
SPTLC1P2-201ENST00000407089 LOC100509620A0A075B734 347 aa4.34□□□□□ -1.71
SPTLC1P2-201ENST00000407089 A0A096LPI6 279 aa4.34□□□□□ -1.71
SPTLC1P2-201ENST00000407089 ZNF726A6NNF4 738 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms