RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 OR2T29Q8NH02 315 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 ZNF519Q8TB69 540 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 GNPDA2Q8TDQ7 276 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 GPX7Q96SL4 187 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-202ENST00000340477 MOKQ9UQ07 419 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 LYVE1Q9Y5Y7 322 aa16.71■□□□□ 0.27
SYNE4-202ENST00000340477 PLCE1Q9P212 2302 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 ACOT8O14734 319 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 AHCYL1O43865 530 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 CCNB2O95067 398 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 SLC2A10O95528 541 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 BMP4P12644 408 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 SDHAP31040 664 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 SLC6A6P31641 620 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 ZNF133P52736 654 aaPredicted RBP16.7■□□□□ 0.26
SYNE4-202ENST00000340477 RAB1AP62820 205 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 PIGFQ07326 219 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 KRR1Q13601 381 aaKnown RBP16.7■□□□□ 0.26
SYNE4-202ENST00000340477 FHL1Q13642 323 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 GK3PQ14409 553 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 DPY19L2P2Q6ZN68 376 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 SLC16A14Q7RTX9 510 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 ZER1Q7Z7L7 766 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 OR4F15Q8NGB8 312 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 NSMAFQ92636 917 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 TRMT61AQ96FX7 289 aaKnown RBP16.7■□□□□ 0.26
SYNE4-202ENST00000340477 PERPQ96FX8 193 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 RNF121Q9H920 327 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 ADAM18Q9Y3Q7 739 aa16.7■□□□□ 0.26
SYNE4-202ENST00000340477 SAMHD1Q9Y3Z3 626 aaKnown RBP16.7■□□□□ 0.26
SYNE4-202ENST00000340477 VSTM5A8MXK1 200 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 E7EQL1 145 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 GNGT2O14610 69 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 GSC2O15499 205 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 PTP4A3O75365 173 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 GIPRP48546 466 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 NKX6-1P78426 367 aaPredicted RBP16.69■□□□□ 0.26
SYNE4-202ENST00000340477 FMODQ06828 376 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 TSPAN31Q12999 210 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 SHEQ5VZ18 495 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 RPL13AP3Q6NVV1 102 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 PGM2L1Q6PCE3 622 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 ADCK1Q86TW2 530 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 SKA3Q8IX90 412 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 MUC15Q8N387 334 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 OR52L1Q8NGH7 329 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 Q96M85 177 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 CCNB1IP1Q9NPC3 277 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 B3GNT2Q9NY97 397 aa16.69■□□□□ 0.26
SYNE4-202ENST00000340477 AKAP9Q99996 3911 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 TEX13CA0A0J9YWL9 993 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 A0A1W2PPL8 197 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 ZNF503-AS2A6NEH8 195 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 PTHP01270 115 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 SOD3P08294 240 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 CELA3BP08861 270 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 DANCRP0C864 163 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 TTKP33981 857 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 PTH2RP49190 550 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 HMGA2P52926 109 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 MRPS34P82930 218 aaKnown RBP16.68■□□□□ 0.26
SYNE4-202ENST00000340477 PLP2Q04941 152 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 SGCAQ16586 387 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 PGGHGQ32M88 737 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 C1orf94Q6P1W5 598 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 PGBD2Q6P3X8 592 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 DTX2Q86UW9 622 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 ADGRG5Q8IZF4 528 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 SH3GL3Q99963 347 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 TRAF4Q9BUZ4 470 aaPredicted RBP16.68■□□□□ 0.26
SYNE4-202ENST00000340477 IFT27Q9BW83 186 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 CHID1Q9BWS9 393 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 CADM1Q9BY67 442 aaKnown RBP16.68■□□□□ 0.26
SYNE4-202ENST00000340477 GSX2Q9BZM3 304 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 OR52D1Q9H346 318 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 MMADHCQ9H3L0 296 aaPredicted RBP16.68■□□□□ 0.26
SYNE4-202ENST00000340477 C1orf198Q9H425 327 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 SEC61A2Q9H9S3 476 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 SIAEQ9HAT2 523 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 NRIP3Q9NQ35 241 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 CBLN4Q9NTU7 201 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 IL20RAQ9UHF4 553 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 POMPQ9Y244 141 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 SPEF1Q9Y4P9 236 aa16.68■□□□□ 0.26
SYNE4-202ENST00000340477 PRRC2AP48634 2157 aaKnown RBP16.68■□□□□ 0.26
SYNE4-202ENST00000340477 PRSS37A4D1T9 235 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 CST1P01037 141 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 APEHP13798 732 aaKnown RBP16.67■□□□□ 0.26
SYNE4-202ENST00000340477 NOS3P29474 1203 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 APOBEC3AP31941 199 aaPredicted RBP16.67■□□□□ 0.26
SYNE4-202ENST00000340477 GSSP48637 474 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 ATP5J2P56134 94 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 GALK2Q01415 458 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 HSF2Q03933 536 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 RFX4Q33E94 735 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 MESTQ5EB52 335 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 Q5PR19 223 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 DNM1P34Q6PK57 102 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 SLC25A47Q6Q0C1 308 aa16.67■□□□□ 0.26
SYNE4-202ENST00000340477 B3GLCTQ6Y288 498 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms