RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CD300LDQ6UXZ3 194 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 NPSR1Q6W5P4 371 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 MKXQ8IYA7 352 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 CDCP1Q9H5V8 836 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 ZNFX1Q9P2E3 1918 aaKnown RBP15.27■□□□□ 0.04
PHRF1-201ENST00000264555 H7C2Y5 167 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 ACHEP22303 614 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF93P35789 620 aaPredicted RBP15.27■□□□□ 0.04
PHRF1-201ENST00000264555 EVX1P49640 407 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 CDK5R1Q15078 307 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 FAM109BQ6ICB4 259 aaPredicted RBP15.27■□□□□ 0.04
PHRF1-201ENST00000264555 VN1R4Q7Z5H5 301 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 EHFQ9NZC4 300 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 FABP7O15540 132 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF254O75437 659 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 IGHA2P01877 340 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 DBHP09172 617 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 NAGAP17050 411 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 SSTR2P30874 369 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 CCR6P51684 374 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 AKR1C2P52895 323 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 GRB2P62993 217 aaKnown RBP15.27■□□□□ 0.04
PHRF1-201ENST00000264555 EGR3Q06889 387 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 FZD2Q14332 565 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 FCN2Q15485 313 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 TMPRSS11FQ6ZWK6 438 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 ZNF695Q8IW36 515 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 IFI44Q8TCB0 444 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 CPT1CQ8TCG5 803 aa15.27■□□□□ 0.04
PHRF1-201ENST00000264555 A0A0A6YYH2 397 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 A6NJ64 397 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 DOK2O60496 412 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 SOD1P00441 154 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 LSM5Q9Y4Y9 91 aaKnown RBP15.27■□□□□ 0.03
PHRF1-201ENST00000264555 ARID2Q68CP9 1835 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 GABARAPH6UMI1 98 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 K7EQS6 105 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 PTPN6P29350 595 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 UQCRC1P31930 480 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 GPNMBQ14956 572 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 CPEB2Q7Z5Q1 589 aaKnown RBP15.27■□□□□ 0.03
PHRF1-201ENST00000264555 BPHLQ86WA6 291 aaPredicted RBP15.27■□□□□ 0.03
PHRF1-201ENST00000264555 GJC3Q8NFK1 279 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 ISG20L2Q9H9L3 353 aaKnown RBP15.27■□□□□ 0.03
PHRF1-201ENST00000264555 REV1Q9UBZ9 1251 aa15.27■□□□□ 0.03
PHRF1-201ENST00000264555 HSPB2A8KAH6 182 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 PRKNO60260 465 aaPredicted RBP15.26■□□□□ 0.03
PHRF1-201ENST00000264555 ZNF806P0C7X5 589 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 TCN2P20062 427 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 HSPB2Q16082 182 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 ELP2Q6IA86 826 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 ZNF425Q6IV72 752 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 TMEM92Q6UXU6 159 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 CADM4Q8NFZ8 388 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 OR4N2Q8NGD1 307 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 SLC7A6Q92536 515 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 NICN1Q9BSH3 213 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 C20orf85Q9H1P6 137 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 EMC7Q9NPA0 242 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 ZNF705EA8MWA4 302 aaPredicted RBP15.26■□□□□ 0.03
PHRF1-201ENST00000264555 EXOSC6Q5RKV6 272 aaKnown RBP15.26■□□□□ 0.03
PHRF1-201ENST00000264555 OR4Q3Q8NH05 313 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 SLC35B4Q969S0 331 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 POU2F3Q9UKI9 436 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 NOSIPQ9Y314 301 aaKnown RBP15.26■□□□□ 0.03
PHRF1-201ENST00000264555 HOXB3P14651 431 aaPredicted RBP15.26■□□□□ 0.03
PHRF1-201ENST00000264555 RAC2P15153 192 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 TMEM71Q6P5X7 295 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 Q6ZTK2 550 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 EIF5A2Q9GZV4 153 aaKnown RBP15.26■□□□□ 0.03
PHRF1-201ENST00000264555 S1PR5Q9H228 398 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 A0A0B4J2E0 115 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 A0A1B0GX12 115 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 GREM1O60565 184 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 ZNF616Q08AN1 781 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 PRSS45Q7RTY3 260 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 CMSS1Q9BQ75 279 aaKnown RBP15.26■□□□□ 0.03
PHRF1-201ENST00000264555 SELENOIQ9C0D9 397 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 ZNF436Q9C0F3 470 aaPredicted RBP15.26■□□□□ 0.03
PHRF1-201ENST00000264555 SLIRPQ9GZT3 109 aaKnown RBP15.26■□□□□ 0.03
PHRF1-201ENST00000264555 NELFAQ9H3P2 528 aa15.26■□□□□ 0.03
PHRF1-201ENST00000264555 A0A087WUJ7 227 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 PRAMEF4O60810 478 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 PRAMEF9Q5VWM5 478 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 ZNF546Q86UE3 836 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 OR11A1Q9GZK7 315 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 AIPO00170 330 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 VAMP5O95183 116 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 ZGLP1P0C6A0 271 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 CLDN6P56747 220 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 PRTGQ2VWP7 1150 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 SMAP2Q8WU79 429 aaPredicted RBP15.25■□□□□ 0.03
PHRF1-201ENST00000264555 TXNIPQ9H3M7 391 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 PRSS37A4D1T9 235 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 TMEM221A6NGB7 291 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 CYB561P49447 251 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 SRP9P49458 86 aaKnown RBP15.25■□□□□ 0.03
PHRF1-201ENST00000264555 CSRP3P50461 194 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 MAP2K6P52564 334 aa15.25■□□□□ 0.03
PHRF1-201ENST00000264555 RHEBQ15382 184 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms