RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FAM174AQ8TBP5 190 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 FAM46BQ96A09 425 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DTD2Q96FN9 168 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.4
SCARB2-227ENST00000640957 SLC6A7Q99884 636 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 ZNF350Q9GZX5 532 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 ZFP57Q9NU63 452 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DZANK1Q9NVP4 752 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DUX4Q9UBX2 424 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 CHD9Q3L8U1 2897 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 ZNF106Q9H2Y7 1883 aaKnown RBP12.52□□□□□ -0.4
SCARB2-227ENST00000640957 DENND4CQ5VZ89 1909 aa12.52□□□□□ -0.4
SCARB2-227ENST00000640957 OTOL1A6NHN0 477 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-227ENST00000640957 AQP8O94778 261 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 PLGP00747 810 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-227ENST00000640957 IL5P05113 134 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 CPT2P23786 658 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 CD80P33681 288 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 F2RL1P55085 397 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 EIF2S3LQ2VIR3 472 aaKnown RBP12.52□□□□□ -0.41
SCARB2-227ENST00000640957 PDZD11Q5EBL8 140 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 LCTLQ6UWM7 567 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 C5orf46Q6UWT4 87 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 CRIPAKQ8N1N5 446 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 GVQW1Q8N7I0 195 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 OR4N2Q8NGD1 307 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 OR56A1Q8NGH5 318 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 BADQ92934 168 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 MOAP1Q96BY2 351 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 SDF2Q99470 211 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 ACTRT3Q9BYD9 372 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 ZBP1Q9H171 429 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 OR52A5Q9H2C5 316 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 GAREM1Q9H706 876 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 APOBEC3BQ9UH17 382 aaKnown RBP12.52□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF223Q9UK11 482 aaPredicted RBP12.52□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF281Q9Y2X9 895 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 A6NLC8 198 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 CTDSPLO15194 276 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 GAAP10253 952 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 ADRB3P13945 408 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 NME2P22392 152 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 FAUP35544 74 aaKnown RBP12.52□□□□□ -0.41
SCARB2-227ENST00000640957 PBX2P40425 430 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 MNDAP41218 407 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 SKP2Q13309 424 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 TRAM1Q15629 374 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 NKAPLQ5M9Q1 402 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 CLEC9AQ6UXN8 241 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 EIF4E3Q8N5X7 224 aaKnown RBP12.52□□□□□ -0.41
SCARB2-227ENST00000640957 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
SCARB2-227ENST00000640957 DCUN1D4Q92564 292 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 MS4A6EQ96DS6 147 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 CNTNAP3BQ96NU0 1288 aa12.52□□□□□ -0.41
SCARB2-227ENST00000640957 A0A1W2PPV9 198 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 OGG1O15527 345 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 ARG1P05089 322 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF14P17017 642 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-227ENST00000640957 PRKXP51817 358 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 IL10RAQ13651 578 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 NKAIN2Q5VXU1 208 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 FCRL6Q6DN72 434 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 RPL22L1Q6P5R6 122 aaKnown RBP12.51□□□□□ -0.41
SCARB2-227ENST00000640957 ZNF704Q6ZNC4 412 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-227ENST00000640957 DCUN1D3Q8IWE4 304 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 COX18Q8N8Q8 333 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 INO80EQ8NBZ0 244 aaPredicted RBP12.51□□□□□ -0.41
SCARB2-227ENST00000640957 NR4A3Q92570 626 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 MIB2Q96AX9 1013 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 PIGMQ9H3S5 423 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 TMEM235A6NFC5 223 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 C9JQL5 133 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 H7C417 338 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 DCTN6O00399 190 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 ITGA10O75578 1167 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 SLC2A5P22732 501 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 GABRA3P34903 492 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 PRSS3P35030 304 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 CASRP41180 1078 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 COL4A3Q01955 1670 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 AIMP2Q13155 320 aaKnown RBP12.51□□□□□ -0.41
SCARB2-227ENST00000640957 CYB5R2Q6BCY4 276 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 C11orf87Q6NUJ2 197 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 TTLL10Q6ZVT0 673 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 OR5AK2Q8NH90 309 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 ZC3H10Q96K80 434 aaKnown RBP12.51□□□□□ -0.41
SCARB2-227ENST00000640957 SAGE1Q9NXZ1 904 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 FLRT3Q9NZU0 649 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 EMC3Q9P0I2 261 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 FRRS1LQ9P0K9 344 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 MTFP1Q9UDX5 166 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 TMED7Q9Y3B3 224 aa12.51□□□□□ -0.41
SCARB2-227ENST00000640957 A0A1B0GWA3 101 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 EIF1BO60739 113 aaKnown RBP12.5□□□□□ -0.41
SCARB2-227ENST00000640957 CXCL10P02778 98 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 KLK3P07288 261 aaPredicted RBP12.5□□□□□ -0.41
SCARB2-227ENST00000640957 ITGA5P08648 1049 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 AKAIN1P0CW23 69 aa12.5□□□□□ -0.41
SCARB2-227ENST00000640957 EIF1P41567 113 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms