RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 LSP1P33241 339 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 ZNF81P51508 661 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 RPL15P61313 204 aaKnown RBP11.65□□□□□ -0.54
SNX1-214ENST00000625244 PAX2Q02962 417 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 FUT5Q11128 374 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 SPRNQ5BIV9 151 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 C6orf120Q7Z4R8 191 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 TMEM123Q8N131 208 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 POU5F2Q8N7G0 328 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 PIK3C3Q8NEB9 887 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 FGFBP3Q8TAT2 258 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 SGCDQ92629 289 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 SLC47A1Q96FL8 570 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 C3orf30Q96M34 536 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 OR2M2Q96R28 347 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 C1orf50Q9BV19 199 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 SLCO1B3Q9NPD5 702 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 B3GAT1Q9P2W7 334 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 OR5V1Q9UGF6 321 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 USH1CQ9Y6N9 552 aa11.65□□□□□ -0.54
SNX1-214ENST00000625244 DOCK11Q5JSL3 2073 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
SNX1-214ENST00000625244 FAAHO00519 579 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 POLR3GO15318 223 aaPredicted RBP11.64□□□□□ -0.55
SNX1-214ENST00000625244 DHHO43323 396 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 GPR137BO60478 399 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 TGDSO95455 350 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 SERPINA5P05154 406 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 GUSBP08236 651 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 OR12D1P0DN82 309 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 PNMTP11086 282 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 CCL2P13500 99 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 SOAT1P35610 550 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 HBA1P69905 142 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 EMX2Q04743 252 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 EPS8Q12929 822 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 LSM12Q3MHD2 195 aaKnown RBP11.64□□□□□ -0.55
SNX1-214ENST00000625244 FAM209AQ5JX71 171 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 C1orf140Q5VVS0 124 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 IL23RQ5VWK5 629 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 ZNF627Q7L945 461 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 KLHL36Q8N4N3 616 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 SPICQ8N5J4 248 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 ZNF519Q8TB69 540 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 C11orf40Q8WZ69 217 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 DYRK2Q92630 601 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 ROPN1LQ96C74 230 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 NEURL3Q96EH8 262 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 OR51I1Q9H343 314 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 DENND2DQ9H6A0 471 aaPredicted RBP11.64□□□□□ -0.55
SNX1-214ENST00000625244 AKTIPQ9H8T0 292 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 EXD2Q9NVH0 621 aa11.64□□□□□ -0.55
SNX1-214ENST00000625244 CFAP73A6NFT4 308 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 A8MVM7 634 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 FTCDNL1E5RQL4 147 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 F5H0A9 414 aaPredicted RBP11.63□□□□□ -0.55
SNX1-214ENST00000625244 CFLARO15519 480 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 VIMP08670 466 aaKnown RBP11.63□□□□□ -0.55
SNX1-214ENST00000625244 TFPTP0C1Z6 253 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 TROVE2P10155 538 aaKnown RBP eCLIP11.63□□□□□ -0.55
SNX1-214ENST00000625244 MDH1P40925 334 aaKnown RBP11.63□□□□□ -0.55
SNX1-214ENST00000625244 RBBP4Q09028 425 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 MFSD13AQ14CX5 517 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 TMEM255AQ5JRV8 349 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 CARD17Q5XLA6 110 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 LRRN1Q6UXK5 716 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 Q6ZSV7 163 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 RNF130Q86XS8 419 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 C20orf196Q8IYI0 205 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 XAGE5Q8WWM1 108 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 GEMIN6Q8WXD5 167 aaKnown RBP11.63□□□□□ -0.55
SNX1-214ENST00000625244 SLC25A36Q96CQ1 311 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 SLC35G5Q96KT7 338 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 SIKE1Q9BRV8 207 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 POLE3Q9NRF9 147 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 ATAD3AQ9NVI7 634 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 ASIC5Q9NY37 505 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 GIMAP2Q9UG22 337 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 POFUT2Q9Y2G5 429 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 POMT1Q9Y6A1 747 aa11.63□□□□□ -0.55
SNX1-214ENST00000625244 PRAMEF27A3QJZ7 478 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 SDHDO14521 159 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 EDF1O60869 148 aaKnown RBP11.62□□□□□ -0.55
SNX1-214ENST00000625244 NPIPB7O75200 414 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 UBL3O95164 117 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 MPIG6BO95866 241 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 IGHV3-13P01766 116 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 MT-ND5P03915 603 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 PRPS1L1P21108 318 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 DRD4P21917 467 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 EPHA3P29320 983 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 MMP15P51511 669 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 GUCY1A3Q02108 690 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 CAMK2DQ13557 499 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 C1DQ13901 141 aaKnown RBP11.62□□□□□ -0.55
SNX1-214ENST00000625244 GSTA3Q16772 222 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 TMEM155Q4W5P6 130 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 ESCO2Q56NI9 601 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 OGFOD2Q6N063 350 aa11.62□□□□□ -0.55
SNX1-214ENST00000625244 BTNL3Q6UXE8 466 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms