RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 MT-ATP6P00846 226 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 P04436 131 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 NAGAP17050 411 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 ENDOUP21128 410 aaKnown RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 TGM1P22735 817 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 APEX1P27695 318 aaKnown RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 LCN1P31025 176 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 HTR3AP46098 478 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PPP5CP53041 499 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 CLDN20P56880 219 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 MLF1P58340 268 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 ACTC1P68032 377 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 ACTA1P68133 377 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 SSPNQ14714 243 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 WIPI1Q5MNZ9 446 aaPredicted RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 STPG1Q5TH74 334 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 CDCP2Q5VXM1 449 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 DCDC5Q6ZRR9 648 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 ESPNLQ6ZVH7 1005 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 CROCCP3Q8IVE0 287 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 TIGD4Q8IY51 512 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 DNAAF1Q8NEP3 725 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 M1APQ8TC57 530 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 S100ZQ8WXG8 99 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PGLYRP3Q96LB9 341 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 GPX7Q96SL4 187 aaPredicted RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 RNF32Q9H0A6 362 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 MIXL1Q9H2W2 232 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 EMC7Q9NPA0 242 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 CHST11Q9NPF2 352 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 DEPPQ9NTK1 212 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 MRPL22Q9NWU5 206 aaKnown RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 CCDC59Q9P031 241 aaKnown RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 MRM2Q9UI43 246 aaKnown RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 ST6GALNAC2Q9UJ37 374 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 FBXL3Q9UKT7 428 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 CMAHPQ9Y471 501 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PCDHGB6Q9Y5F9 930 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PCDHGB2Q9Y5G2 931 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PEX16Q9Y5Y5 336 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 DOCK7Q96N67 2140 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 DMXL2Q8TDJ6 3036 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 AKAP13Q12802 2813 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 TRABD2BA6NFA1 517 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 ARGFXA6NJG6 315 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 FAM166BA8MTA8 275 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PLPP2O43688 288 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 IDH3BO43837 385 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 ZIC3O60481 467 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 DKK1O94907 266 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 WDPCPO95876 746 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 IL1AP01583 271 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 KRT8P05787 483 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 FCER2P06734 321 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 CD97P48960 835 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 GABREP78334 506 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 POU4F2Q12837 409 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 EIF2B1Q14232 305 aaKnown RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 CDK5R1Q15078 307 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 P2RY14Q15391 338 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 BAK1Q16611 211 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PYDC2Q56P42 97 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 HES5Q5TA89 166 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 NUP210LQ5VU65 1888 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 TIGD3Q6B0B8 471 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 GPR139Q6DWJ6 353 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 DMKNQ6E0U4 476 aaPredicted RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 C3orf33Q6P1S2 294 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 LRFN4Q6PJG9 635 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 METAP1DQ6UB28 335 aaPredicted RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 GDPGP1Q6ZNW5 385 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 SLC16A9Q7RTY1 509 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 TMPRSS7Q7RTY8 843 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 FAM220AQ7Z4H9 259 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 GPALPP1Q8IXQ4 340 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 ZNF676Q8N7Q3 588 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 EXD3Q8N9H8 876 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 POMGNT2Q8NAT1 580 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 STK35Q8TDR2 534 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 LIPHQ8WWY8 451 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 ROBO4Q8WZ75 1007 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PSMF1Q92530 271 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 MRGPRX4Q96LA9 322 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 SIGLEC12Q96PQ1 595 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 NOX4Q9NPH5 578 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 HAO2Q9NYQ3 351 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 FRRS1LQ9P0K9 344 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 LRFN1Q9P244 771 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 CRNNQ9UBG3 495 aaPredicted RBP3.08□□□□□ -1.92
LIG4-205ENST00000614526 RASD1Q9Y272 281 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PCDHGB7Q9Y5F8 929 aa3.08□□□□□ -1.92
LIG4-205ENST00000614526 PNPP00491 289 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 IGHV3-9P01782 118 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 MAS1P04201 325 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 CELA3AP09093 270 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 FTH1P19P0C7X4 201 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SLC2A1P11166 492 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 SNRPBP14678 240 aaKnown RBP3.07□□□□□ -1.92
LIG4-205ENST00000614526 SPNP16150 400 aa3.07□□□□□ -1.92
LIG4-205ENST00000614526 ZNF823P16415 610 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms