RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PRPF19Q9UMS4 504 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-203ENST00000594298 IGHV4-61A0A0C4DH41 118 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 SLC35F4A4IF30 521 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 ARPC2O15144 300 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 RNF13O43567 381 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 TRAF3IP2O43734 574 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 OR7A10O76100 309 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 HPRP00739 348 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 IGLV1-44P01699 117 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 CRYAAP02489 173 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 T-ENOLP0DO92 83 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 APEHP13798 732 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 RHCEP18577 417 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 UGT2B15P54855 530 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 UBE2NP61088 152 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 ADIPOQQ15848 244 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 RINLQ6ZS11 566 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 SLC46A3Q7Z3Q1 461 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 GPR137CQ8N3F9 429 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 ZNF540Q8NDQ6 660 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 PFN4Q8NHR9 129 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 LIPHQ8WWY8 451 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 BCL2L2Q92843 193 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 POP5Q969H6 163 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 FOXN4Q96NZ1 517 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 C19orf24Q9BVV8 132 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 PLK3Q9H4B4 646 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 B3GAT2Q9NPZ5 323 aa15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 FBXO9Q9UK97 447 aaPredicted RBP15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 YLPM1P49750 1951 aaKnown RBP15.22■□□□□ 0.03
SHKBP1-203ENST00000594298 C11orf98E9PRG8 122 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 BLOC1S5-TXNDC5H3BN57 136 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 J3KTA2 159 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 ZNF432O94892 652 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 STAMBPO95630 424 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 ASAH2BP0C7U1 165 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 HOXB1P14653 301 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 ZNF23P17027 643 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 HNF1AP20823 631 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 MSX2P35548 267 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 PPOXP50336 477 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 SH3BGRP55822 239 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 SMIM11AP58511 58 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 NAAAQ02083 359 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 MTX3Q5HYI7 312 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 ANKRD16Q6P6B7 361 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 ZNF730Q6ZMV8 503 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 LINGO2Q7L985 606 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 ACOT11Q8WXI4 607 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 LRR1Q96L50 414 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 ALKBH3Q96Q83 286 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 VRK1Q99986 396 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 CHODLQ9H9P2 273 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 NMNAT1Q9HAN9 279 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 TAS2R5Q9NYW4 299 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 ACTR3BQ9P1U1 418 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 RHCGQ9UBD6 479 aa15.21■□□□□ 0.03
SHKBP1-203ENST00000594298 RPL36A-HNRNPH2H7BZ11 118 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 FFAR1O14842 300 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 UPK3AO75631 287 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 SERPINI2O75830 405 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 IGKV3-15P01624 115 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 H1F0P07305 194 aaKnown RBP15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 OR4A8P0C604 315 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 CECR9P0C854 216 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 IFI30P13284 250 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 HLA-DOBP13765 273 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 LGALS3BPQ08380 585 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 ANKDD1AQ495B1 522 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 LRRC17Q8N6Y2 441 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 NUP37Q8NFH4 326 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 OR4F15Q8NGB8 312 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 BPIFA2Q96DR5 249 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 OR2M2Q96R28 347 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 BPESC1Q9GZL8 116 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 NELFAQ9H3P2 528 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 TAS2R1Q9NYW7 299 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 NDUFAF4Q9P032 175 aa15.2■□□□□ 0.02
SHKBP1-203ENST00000594298 A0A1W2PRG6 482 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 IFNGR1P15260 489 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 IDH3GP51553 393 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 ROR2Q01974 943 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 PRKCDQ05655 676 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 TRIM25Q14258 630 aaKnown RBP15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 IQCCQ4KMZ1 466 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 DNAL1Q4LDG9 190 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 NHLRC1Q6VVB1 395 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 IL17RELQ6ZVW7 336 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 MBOAT2Q6ZWT7 520 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 SLC35D2Q76EJ3 337 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 HDDC2Q7Z4H3 204 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 DHFR2Q86XF0 187 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 NRMQ8IXM6 262 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 C20orf196Q8IYI0 205 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 OR6N1Q8NGY5 312 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 TXNDC15Q96J42 360 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 C7orf34Q96L11 122 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 RAB1BQ9H0U4 201 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 ZNF442Q9H7R0 627 aa15.19■□□□□ 0.02
SHKBP1-203ENST00000594298 KRCC1Q9NPI7 259 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms