RNA–Protein interactions for RNA: ENST00000589050.1

RPRD1A-208, Transcript of regulation of nuclear pre-mRNA domain containing 1A, human

TSL 1 (best)

Gene RPRD1A, Length 1,022 nt, Biotype non stop decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPRD1A-208	ENST00000589050	GABARAPL3	Q9BY60	117 aa		13.63	□□□□□ -0.23
RPRD1A-208	ENST00000589050	CRLF2	Q9HC73	371 aa		13.63	□□□□□ -0.23
RPRD1A-208	ENST00000589050	MED12L	Q86YW9	2145 aa		13.63	□□□□□ -0.23
RPRD1A-208	ENST00000589050	RP1L1	Q8IWN7	2480 aa	Predicted RBP	13.63	□□□□□ -0.23
RPRD1A-208	ENST00000589050	NCOA6	Q14686	2063 aa	Predicted RBP	13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SLC22A23	A1A5C7	686 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	PRSS37	A4D1T9	235 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	RPL36A-HNRNPH2	H7BZ11	118 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	AHCYL1	O43865	530 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	LYZL6	O75951	148 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	REN	P00797	406 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ITGA5	P08648	1049 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	COX5A	P20674	150 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	GRN	P28799	593 aa	Known RBP	13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	EPHA2	P29317	976 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	MPG	P29372	298 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	FMOD	Q06828	376 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	TSC22D1	Q15714	1073 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	CEACAM16	Q2WEN9	425 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ZIK1	Q3SY52	487 aa	Predicted RBP	13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	THEM4	Q5T1C6	240 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ACSM5	Q6NUN0	579 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	LRFN4	Q6PJG9	635 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	STAC2	Q6ZMT1	411 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SDR9C7	Q8NEX9	313 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	FNDC8	Q8TC99	324 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	KISS1R	Q969F8	398 aa	Predicted RBP	13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	NMNAT3	Q96T66	252 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SLC25A19	Q9HC21	320 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	C8orf4	Q9NR00	106 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	TAS2R16	Q9NYV7	291 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	KLHL21	Q9UJP4	597 aa		13.62	□□□□□ -0.23
RPRD1A-208	ENST00000589050	CIB4	A0PJX0	185 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	RIIAD1	A6NNX1	92 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	C16orf97	H3BN30	126 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SLC2A10	O95528	541 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	IFNG	P01579	166 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	HMGN1	P05114	100 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	IL32	P24001	234 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	UGT2B10	P36537	528 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	POLR2I	P36954	125 aa	Known RBP	13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	TGFBR3	Q03167	851 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SFRP5	Q5T4F7	317 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	PACRGL	Q8N7B6	248 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	NSMAF	Q92636	917 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	NMD3	Q96D46	503 aa	Known RBP	13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ZNF837	Q96EG3	531 aa	Predicted RBP	13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SNX18	Q96RF0	628 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	HDHD5	Q9BXW7	423 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SYT4	Q9H2B2	425 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	TOR3A	Q9H497	397 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	VSX1	Q9NZR4	365 aa	Predicted RBP	13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	GPR52	Q9Y2T5	361 aa		13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	KLF2	Q9Y5W3	355 aa	Predicted RBP	13.61	□□□□□ -0.23
RPRD1A-208	ENST00000589050	IGKV1D-43	A0A0B4J1Z2	117 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050		A1L4Q6	167 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ZAR1L	A6NP61	321 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	DHH	O43323	396 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	RAD51D	O75771	328 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SNAP29	O95721	258 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ZNF3	P17036	446 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	PSMB1	P20618	241 aa	Known RBP	13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	CCKAR	P32238	428 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	PCYT1A	P49585	367 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ZNF84	P51523	738 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SH3BGR	P55822	239 aa	Predicted RBP	13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ARF1	P84077	181 aa	Known RBP	13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	C10orf128	Q5T292	105 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SLX4IP	Q5VYV7	408 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SLC25A47	Q6Q0C1	308 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	CYB561A3	Q8NBI2	242 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SLC37A3	Q8NCC5	494 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	NPEPL1	Q8NDH3	523 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	NRG4	Q8WWG1	115 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	PLEKHA8	Q96JA3	519 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SLC38A2	Q96QD8	506 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	MBOAT4	Q96T53	435 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	VCX	Q9H320	206 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	FN3K	Q9H479	309 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	RERGL	Q9H628	205 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	NPDC1	Q9NQX5	325 aa	Predicted RBP	13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	CMC2	Q9NRP2	79 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SMPD3	Q9NY59	655 aa	Predicted RBP	13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	TVP23B	Q9NYZ1	205 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	MYO7B	Q6PIF6	2116 aa		13.6	□□□□□ -0.23
RPRD1A-208	ENST00000589050	OR6C68	A6NDL8	312 aa		13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ZNF99	A8MXY4	864 aa	Predicted RBP	13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	PRSS44	E7EML9	344 aa		13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	C19orf84	I3L1E1	186 aa		13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SURF4	O15260	269 aa		13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SLC16A7	O60669	478 aa		13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SEC14L2	O76054	403 aa		13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	CLDN1	O95832	211 aa		13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	ZNF133	P52736	654 aa	Predicted RBP	13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	CRMP1	Q14194	572 aa		13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	STK11	Q15831	433 aa		13.59	□□□□□ -0.23
RPRD1A-208	ENST00000589050	SNAPC1	Q16533	368 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms