RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 VWDEQ8N2E2 1590 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 SCN2BO60939 215 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 GYPBP06028 91 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 OR4A8P0C604 315 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC35G6P0C7Q6 338 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TRGC1P0CF51 173 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF252P-AS1Q0IIN9 211 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM95Q3KNT9 176 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 B3GNTL1Q67FW5 361 aaPredicted RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 CDC42EP5Q6NZY7 148 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 GRINAQ7Z429 371 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TSEN54Q7Z6J9 526 aaKnown RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 OR51A7Q8NH64 312 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 OR52I2Q8NH67 350 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 FCRL5Q96RD9 977 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 CHRDL1Q9BU40 450 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 GULP1Q9UBP9 304 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 CNTNAP4Q9C0A0 1308 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TCRBV5S2A0A599 114 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 B3GALT4O96024 378 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF136P52737 540 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 MVDP53602 400 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 UCP2P55851 309 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 RHOAP61586 193 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 CNN3Q15417 329 aaKnown RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF664Q8N3J9 261 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 PIGXQ8TBF5 258 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 PSMG2Q969U7 264 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 CHST5Q9GZS9 411 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 RXFP3Q9NSD7 469 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 DCAF13Q9NV06 445 aaKnown RBP8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 GABRQQ9UN88 632 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 TNFSF18Q9UNG2 199 aa8.3□□□□□ -1.08
GTF2A1-203ENST00000553612 EIF1AYO14602 144 aaKnown RBP8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 IL3P08700 152 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 PLK5Q496M5 336 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 INSM2Q96T92 566 aaPredicted RBP8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 SRSF8Q9BRL6 282 aaKnown RBP8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC25A31Q9H0C2 315 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 RYDENQ9NUL5 291 aaKnown RBP8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 PCTPQ9UKL6 214 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 C2CD4BA6NLJ0 364 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 ZFP92A6NM28 416 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF724A8MTY0 619 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 S1PR4O95977 384 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 HOXB6P17509 224 aaKnown RBP8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC6A1P30531 599 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 UQCRFS1P47985 274 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 CASP7P55210 303 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 NIPSNAP1Q9BPW8 284 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 M0QYG6 137 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 XRCC3O43542 346 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 KDELR2P33947 212 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 EIF1AXP47813 144 aaKnown RBP8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 SMIM11AP58511 58 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 LINC00303Q3SY05 128 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 TECRLQ5HYJ1 363 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 SFXN4Q6P4A7 337 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM205Q6UW68 189 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 NPSR1Q6W5P4 371 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 LGALS14Q8TCE9 139 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM186Q96B77 213 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 FGGYQ96C11 551 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 MAGIXQ9H6Y5 334 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 GOLGA2P5Q9HBQ8 144 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 WSB2Q9NYS7 404 aaPredicted RBP8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 MRPS33Q9Y291 106 aaKnown RBP8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 SGK494L7N484 410 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 CTNSO60931 367 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 AMD1P17707 334 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 UQCRC2P22695 453 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 MESTQ5EB52 335 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF628Q5EBL2 1059 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 FCRLAQ7L513 359 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 PPP1R1CQ8WVI7 109 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 CMKLR1Q99788 373 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 NSUN3Q9H649 340 aaKnown RBP8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 AHSPQ9NZD4 102 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 CNIH4Q9P003 139 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 CITO14578 2027 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 SAMD9LQ8IVG5 1584 aa8.29□□□□□ -1.08
GTF2A1-203ENST00000553612 CCDC187A0A096LP49 1063 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC5A10A0PJK1 596 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 ARL6IP5O75915 188 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 HNRNPA1P09651 372 aaKnown RBP eCLIP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 RPA2P15927 270 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 DVL1P1P54792 670 aaPredicted RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 HNRNPA1L2Q32P51 320 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 MTMR14Q8NCE2 650 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 MED20Q9H944 212 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 SEPSECSQ9HD40 501 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 NDOR1Q9UHB4 597 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 MED31Q9Y3C7 131 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 MYH14Q7Z406 1995 aaKnown RBP8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 B4DEV8 164 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 PCDH7O60245 1069 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 LCATP04180 440 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 METAP1P53582 386 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 MMDQ15546 238 aa8.28□□□□□ -1.08
GTF2A1-203ENST00000553612 SSX1Q16384 188 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms