RNA–Protein interactions for RNA: ENST00000541297.6

CLPTM1-202, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2 BASIC

Gene CLPTM1, Length 2,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-202ENST00000541297 SFXN4Q6P4A7 337 aa13.81□□□□□ -0.2
CLPTM1-202ENST00000541297 OR2M2Q96R28 347 aa13.81□□□□□ -0.2
CLPTM1-202ENST00000541297 TIMP4Q99727 224 aa13.81□□□□□ -0.2
CLPTM1-202ENST00000541297 C12orf10Q9HB07 376 aa13.81□□□□□ -0.2
CLPTM1-202ENST00000541297 BABAM2Q9NXR7 383 aa13.81□□□□□ -0.2
CLPTM1-202ENST00000541297 PCDHGA1Q9Y5H4 931 aa13.81□□□□□ -0.2
CLPTM1-202ENST00000541297 SPAARA0A1B0GVQ0 90 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 FZD7O75084 574 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 PPP1R3DO95685 299 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 PGCP20142 388 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 GALP22466 123 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 PTGS2P35354 604 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 KLHL12Q53G59 568 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 TMEM164Q5U3C3 297 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 TRMT10AQ8TBZ6 339 aaKnown RBP13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 SLC22A8Q8TCC7 542 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 DACT3Q96B18 629 aaPredicted RBP13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 CACNG6Q9BXT2 260 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 CLEC4MQ9H2X3 399 aaPredicted RBP13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 CNOT1A5YKK6 2376 aaKnown RBP13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 J3QRE1 110 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 GPR171O14626 319 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 CFDP00746 253 aaPredicted RBP13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 ST3GAL2Q16842 350 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 SLC25A35Q3KQZ1 300 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 PIP4P1Q86T03 277 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 SIAH3Q8IW03 269 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 TOMM5Q8N4H5 51 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 MOGAT1Q96PD6 335 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 RBP7Q96R05 134 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 ALG8Q9BVK2 526 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 B3GNT4Q9C0J1 378 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 MED20Q9H944 212 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 BEX1Q9HBH7 125 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 MED11Q9P086 117 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 HRH3Q9Y5N1 445 aa13.8□□□□□ -0.2
CLPTM1-202ENST00000541297 IFNA7P01567 189 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 DNASE1P24855 282 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 CXCR1P25024 350 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 HSF2Q03933 536 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 EXT1Q16394 746 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 CLLU1Q5K131 121 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 PYHIN1Q6K0P9 492 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 ARL9Q6T311 187 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 NDUFAF7Q7L592 441 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 CDH24Q86UP0 819 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 PIAS4Q8N2W9 510 aaPredicted RBP13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 ESX1Q8N693 406 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 TMEM99Q8N816 258 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 KTI12Q96EK9 354 aaPredicted RBP13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 NPAS1Q99742 590 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 SPRY4Q9C004 299 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 ADAM19Q9H013 955 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 UBQLN2Q9UHD9 624 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 FARSAQ9Y285 508 aaKnown RBP13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 MRPS7Q9Y2R9 242 aaKnown RBP13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 E9PI62 339 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 TNFSF15O95150 251 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 GP1BBP13224 206 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 F8A1P23610 371 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 FOXK2Q01167 660 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 INPP5JQ15735 1006 aaPredicted RBP13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 GSG1Q2KHT4 349 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 TMEM44Q2T9K0 475 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 RPL13AP3Q6NVV1 102 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 PLBD1Q6P4A8 553 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 CXXC5Q7LFL8 322 aaKnown RBP13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 PPP1R32Q7Z5V6 425 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 ACBD7Q8N6N7 88 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 GALNT11Q8NCW6 608 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 GPR119Q8TDV5 335 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 YIPF5Q969M3 257 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 KCTD12Q96CX2 325 aaKnown RBP13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 ZFP3Q96NJ6 502 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 METTL7AQ9H8H3 244 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 DLL4Q9NR61 685 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 PTTG3PQ9NZH4 202 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 VDAC3Q9Y277 283 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 PCSK5Q92824 1860 aa13.79□□□□□ -0.2
CLPTM1-202ENST00000541297 TOXO94900 526 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 HMGN1P05114 100 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 NOS3P29474 1203 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 DGCR2P98153 550 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 RTL4Q6ZR62 310 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 NUP54Q7Z3B4 507 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 CEACAM19Q7Z692 300 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 LNX2Q8N448 690 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 GIMAP1Q8WWP7 306 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 NXPE2Q96DL1 559 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 SPACA9Q96E40 222 aaPredicted RBP13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 LRFN3Q9BTN0 628 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 COL25A1Q9BXS0 654 aaPredicted RBP13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 KLHL1Q9NR64 748 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 MRPS18BQ9Y676 258 aaKnown RBP13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 CUL9Q8IWT3 2517 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 MEIKINA0A087WXM9 373 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 A0A0G2JK05 382 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 MCIDASD6RGH6 385 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 BLOC1S5-TXNDC5H3BN57 136 aa13.78□□□□□ -0.2
CLPTM1-202ENST00000541297 PAICSP22234 425 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms