RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 CLDN15P56746 228 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 MTPNP58546 118 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 CDK6Q00534 326 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 GTF3C1Q12789 2109 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 SKP2Q13309 424 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 CBFBQ13951 182 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 TOMM34Q15785 309 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 PLPPR5Q32ZL2 321 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 NDUFAF6Q330K2 333 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 SLC25A53Q5H9E4 307 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 RABL3Q5HYI8 236 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 DCST1Q5T197 706 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 GCNT6Q5T4J0 391 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 ATPAF1Q5TC12 328 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 RAET1LQ5VY80 246 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 RTL6Q6ICC9 239 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 TMEM211Q6ICI0 200 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 HMBOX1Q6NT76 420 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 REEP3Q6NUK4 255 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 C3P1Q6ZMU1 363 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 NET1Q7Z628 596 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 HMGN2P46Q86SG4 172 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 CALHM3Q86XJ0 350 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 VRK2Q86Y07 508 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 PTOV1Q86YD1 416 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 WFDC8Q8IUA0 241 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 ULK2Q8IYT8 1036 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF679Q8IYX0 411 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 EID3Q8N140 333 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 GTPBP8Q8N3Z3 284 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 ASCC1Q8N9N2 400 aaKnown RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 FAM71CQ8NEG0 241 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 OR8J3Q8NGG0 315 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 OR4D10Q8NGI6 311 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 OR5M1Q8NGP8 315 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 OR13C3Q8NGS6 347 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 OR52P1PQ8NH57 321 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 OR10A6Q8NH74 314 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 NFKBIDQ8NI38 313 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 ZPLD1Q8TCW7 415 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 CNOT9Q92600 299 aaKnown RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 RCN3Q96D15 328 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 SFXN2Q96NB2 322 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF583Q96ND8 569 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 LRRC37BQ96QE4 947 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 NPAS1Q99742 590 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 VRK1Q99986 396 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 HOPXQ9BPY8 73 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 ECSITQ9BQ95 431 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 RSPO3Q9BXY4 272 aaPredicted RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 TMPRSS13Q9BYE2 586 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 RACGAP1Q9H0H5 632 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 NARFLQ9H6Q4 476 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 UNKLQ9H9P5 680 aaKnown RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 EXOSC3Q9NQT5 275 aaKnown RBP5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 ARL8BQ9NVJ2 186 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 RLIMQ9NVW2 624 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 VDAC3Q9Y277 283 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 CHST2Q9Y4C5 530 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 SVILO95425 2214 aa5.63□□□□□ -1.51
ATPAF1-209ENST00000529214 UBR5O95071 2799 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 PCNX3Q9H6A9 2034 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 SHISA3A0PJX4 238 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 CDHR4A6H8M9 788 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 BTBD17A6NE02 478 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 SHISA8B8ZZ34 492 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 GCM2O75603 506 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 DCTN3O75935 186 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 RPP14O95059 124 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF205O95201 554 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 NTN1O95631 604 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 NUDT14O95848 222 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 TGM6O95932 706 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 CELA3BP08861 270 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 CD3GP09693 182 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 BMP4P12644 408 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF708P17019 499 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 ZNF17P17021 662 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 PGCP20142 388 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 FPR2P25090 351 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 TACR3P29371 465 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 DLX5P56178 289 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 PER3P56645 1201 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 CLDN18P56856 261 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 PCBP3P57721 371 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 TAS2R60P59551 318 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 SELENOVP59797 346 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 ADORA2A-AS1P86434 159 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 PMPCAQ10713 525 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 SMCO1Q147U7 214 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 LARS2Q15031 903 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 QPRTQ15274 297 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 ETFDHQ16134 617 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 ZSWIM7Q19AV6 140 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 MRPL2Q5T653 305 aaKnown RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 SLX4IPQ5VYV7 408 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 FAM91A1Q658Y4 838 aa5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 C8orf82Q6P1X6 216 aaPredicted RBP5.62□□□□□ -1.51
ATPAF1-209ENST00000529214 TRAT1Q6PIZ9 186 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms