RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 GOLGA6L7A0A1B0GV03 622 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 A6NIZ1 184 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 DLGAP1O14490 977 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR2J3O76001 311 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 ERLIN2O94905 339 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 SNAPINO95295 136 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 IGHV3-48P01763 117 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 GIG44P09565 113 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR8G3PP0DMU2 310 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 PEX19P40855 299 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 FBXW4P57775 412 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 RAP1BP61224 184 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 KIAA0040Q15053 153 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 C1orf146Q5VVC0 180 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 Q6ZN92 141 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 BHLHA9Q7RTU4 235 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 SCD5Q86SK9 330 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 C6orf223Q8N319 242 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR10H4Q8NGA5 316 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 ANKRD49Q8WVL7 239 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR1E3Q8WZA6 343 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 PEX13Q92968 403 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 NAF1Q96HR8 494 aaKnown RBP3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 ITCHQ96J02 903 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 SMIM14Q96QK8 99 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR8B4Q96RC9 309 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 P2RY13Q9BPV8 354 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 GBA3Q9H227 469 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 EHD1Q9H4M9 534 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 RNF167Q9H6Y7 350 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 LY9Q9HBG7 655 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF275Q9NSD4 429 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 KCNIP1Q9NZI2 227 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF107Q9UII5 783 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 N4BP2Q86UW6 1770 aaPredicted RBP3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 SCN11AQ9UI33 1791 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 KIF13BQ9NQT8 1826 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 CDHR2Q9BYE9 1310 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 FANCIQ9NVI1 1328 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 SYNRGQ9UMZ2 1314 aa3.93□□□□□ -1.78
HMGB1P3-201ENST00000502802 COL5A3P25940 1745 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 BRCA1P38398 1863 aaKnown RBP3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 FLT4P35916 1363 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 PLEKHG2Q9H7P9 1386 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 RLFQ13129 1914 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF831Q5JPB2 1677 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 IGHV3OR16-13A0A075B7E8 117 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 L7N2F9 121 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 CCL21O00585 134 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 SOX15O60248 233 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR2F2O95006 317 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 IGHV2-5P01817 119 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 C2P06681 752 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 STAG3L3P0CL85 134 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 CXCR2P25025 360 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 RAB9AP51151 201 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 DIO3P55073 304 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 ERVK-25P63136 954 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 CSNK1G2P78368 415 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 MRPS22P82650 360 aaKnown RBP3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 MRPL23Q16540 153 aaKnown RBP3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 TMEM220Q6QAJ8 160 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 OTUD6AQ7L8S5 288 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 PRSS41Q7RTY9 318 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 FAM220AQ7Z4H9 259 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 TMCO2Q7Z6W1 182 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 PIANPQ8IYJ0 282 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 COMMD1Q8N668 190 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 BPIFCQ8NFQ6 507 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR2AP1Q8NGE2 309 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 OR52I1Q8NGK6 324 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 HSFY1Q96LI6 401 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 SORT1Q99523 831 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 SH3GL1Q99961 368 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 TMEM59Q9BXS4 323 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 RACGAP1Q9H0H5 632 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 C20orf85Q9H1P6 137 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 BTNL2Q9UIR0 455 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 MMP17Q9ULZ9 603 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 MOKQ9UQ07 419 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 NSD3Q9BZ95 1437 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 KIAA1551Q9HCM1 1747 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 SBF1O95248 1867 aa3.92□□□□□ -1.78
HMGB1P3-201ENST00000502802 KIF24Q5T7B8 1368 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 GOSR2O14653 212 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 C4AP0C0L4 1744 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 P0C879 139 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 ATP5C1P36542 298 aaKnown RBP3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 CCT6AP40227 531 aaKnown RBP3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 GLP1RP43220 463 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 ARRB1P49407 418 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 SELENOTP62341 195 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 ZNF45Q02386 682 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 TRIM40Q6P9F5 258 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 TMIGD1Q6UXZ0 262 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 SSX9Q7RTT3 188 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 ASCL5Q7RTU5 278 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 SMG6Q86US8 1419 aaKnown RBP3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 CDC20BQ86Y33 519 aa3.91□□□□□ -1.78
HMGB1P3-201ENST00000502802 FBXO16Q8IX29 292 aaPredicted RBP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms