RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 ECSITQ9BQ95 431 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 ULBP2Q9BZM5 246 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 B3GAT2Q9NPZ5 323 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 YAE1D1Q9NRH1 226 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 TMEM38BQ9NVV0 291 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 RIMS3Q9UJD0 308 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 POFUT2Q9Y2G5 429 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 SH3GLB1Q9Y371 365 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 MXRA5Q9NR99 2828 aa8.39□□□□□ -1.07
TMEM39A-210ENST00000490099 LOC100653049A0A140TA62 436 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 hCG_2039718K7EN88 272 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 EBAG9O00559 213 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 DHHO43323 396 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 KRT34O76011 436 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 OR6A2O95222 327 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 IFNA14P01570 189 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 OR8G3PP0DMU2 310 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 B4GALT1P15291 398 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 FUT1P19526 365 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 THBS2P35442 1172 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 SMCPP49901 116 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 PDLIM4P50479 330 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 UGT2B15P54855 530 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 RAB1AP62820 205 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 SELENOWP63302 87 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 RUNX1T1Q06455 604 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 PIGFQ07326 219 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 SF3A3Q12874 501 aaKnown RBP eCLIP8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 PIN1Q13526 163 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 DAG1Q14118 895 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 MAPRE2Q15555 327 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 CYBRD1Q53TN4 286 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 ARMC4Q5T2S8 1044 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 CYB5R2Q6BCY4 276 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 C8orf82Q6P1X6 216 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 DPPA2Q7Z7J5 298 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 NKAIN4Q8IVV8 208 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 SLC15A3Q8IY34 581 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 ZNF786Q8N393 782 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 SLC22A24Q8N4F4 322 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 PCYOX1LQ8NBM8 494 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 SLC26A7Q8TE54 656 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 NEU4Q8WWR8 484 aaPredicted RBP8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 ZNF566Q969W8 418 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 MRPL24Q96A35 216 aaKnown RBP8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 C20orf141Q9NUB4 165 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 GID8Q9NWU2 228 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 FBXL3Q9UKT7 428 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 A4GNTQ9UNA3 340 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 FKBP7Q9Y680 259 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 DNHD1Q96M86 4753 aa8.38□□□□□ -1.07
TMEM39A-210ENST00000490099 IGHV4-61A0A0C4DH41 118 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 POM121CA8CG34 1229 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 FAM220BPB1ANY3 271 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 C11orf98E9PRG8 122 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 OR7A10O76100 309 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 UBL3O95164 117 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 STAMBPO95630 424 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 BCL10O95999 233 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 HIST1H2ABP04908 130 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 QDPRP09417 244 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 TACSTD2P09758 323 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 FAM157CP0CG43 387 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 CD79AP11912 226 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 TNFRSF1BP20333 461 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 FUT4P22083 530 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 GIPRP48546 466 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 GZMKP49863 264 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 IL1RL1Q01638 556 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 RPL18Q07020 188 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 NPRL3Q12980 569 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 RIN1Q13671 783 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 VHLLQ6RSH7 139 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 HIST3H2AQ7L7L0 130 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 TRPM8Q7Z2W7 1104 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 ZCCHC24Q8N2G6 241 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 SVOPLQ8N434 492 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 ZNF540Q8NDQ6 660 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 SPATA3Q8NHX4 192 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 RP9Q8TA86 221 aaKnown RBP8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 TMEM239Q8WW34 195 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 ASB10Q8WXI3 467 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 HIST1H2ACQ93077 130 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 MCHR2Q969V1 340 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 C1orf159Q96HA4 380 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 VRK1Q99986 396 aaPredicted RBP8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 RAB1BQ9H0U4 201 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 CMTM6Q9NX76 183 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 CDC42EP3Q9UKI2 254 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 AP3M1Q9Y2T2 418 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 CMAHPQ9Y471 501 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 UGT2A1Q9Y4X1 527 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 CAPN7Q9Y6W3 813 aa8.37□□□□□ -1.07
TMEM39A-210ENST00000490099 KPNA4O00629 521 aaPredicted RBP8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 FFAR1O14842 300 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 RNF13O43567 381 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 SYNGR3O43761 229 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 LILRA1O75019 489 aa8.36□□□□□ -1.07
TMEM39A-210ENST00000490099 ENTPD5O75356 428 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms