RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 AIG1Q9NVV5 245 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 TESQ9UGI8 421 aaKnown RBP13.64□□□□□ -0.23
DDX56-210ENST00000479440 RAP2CQ9Y3L5 183 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 MMP24Q9Y5R2 645 aa13.64□□□□□ -0.23
DDX56-210ENST00000479440 IQCMA0A1B0GVH7 501 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 A0A1B0GWA3 101 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 PLSCR5A0PG75 271 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 SPRY3O43610 288 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 SERPINI2O75830 405 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 MFN2O95140 757 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 ANP32DO95626 131 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 KNG1P01042 644 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 IGHV3-13P01766 116 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 SERPINE1P05121 402 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 CCL2P13500 99 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 MVDP53602 400 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 UCP2P55851 309 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 SLC9A3R2Q15599 337 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 SLC36A2Q495M3 483 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 KLF17Q5JT82 389 aaPredicted RBP13.63□□□□□ -0.23
DDX56-210ENST00000479440 FAM91A1Q658Y4 838 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 OGFOD2Q6N063 350 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 SPATC1Q76KD6 591 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 PXKQ7Z7A4 578 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 BCL6BQ8N143 479 aaPredicted RBP13.63□□□□□ -0.23
DDX56-210ENST00000479440 EIF1ADQ8N9N8 165 aaKnown RBP13.63□□□□□ -0.23
DDX56-210ENST00000479440 BBS10Q8TAM1 723 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 FGFBP3Q8TAT2 258 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 TMIGD2Q96BF3 282 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 NUF2Q9BZD4 464 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 MMP27Q9H306 513 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 TMEM38BQ9NVV0 291 aa13.63□□□□□ -0.23
DDX56-210ENST00000479440 MRPL39Q9NYK5 338 aaKnown RBP13.63□□□□□ -0.23
DDX56-210ENST00000479440 M0QZ24 198 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 TM9SF1O15321 606 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 ITM2AO43736 263 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 IGHV1-46P01743 117 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 BGLAPP02818 100 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 ZNF12P17014 697 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 AHCYP23526 432 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 RPL14P50914 215 aaKnown RBP13.62□□□□□ -0.23
DDX56-210ENST00000479440 BIDP55957 195 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 ABCE1P61221 599 aaKnown RBP13.62□□□□□ -0.23
DDX56-210ENST00000479440 PLP2Q04941 152 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 ULK3Q6PHR2 472 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 SPICQ8N5J4 248 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 OR1J1Q8NGS3 322 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 WFDC12Q8WWY7 111 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 TMEM54Q969K7 222 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 SLC47A1Q96FL8 570 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 PKP2Q99959 881 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 SH3GL3Q99963 347 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 MEAF6Q9HAF1 191 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 TPT1P8Q9HAU6 139 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 CYSLTR2Q9NS75 346 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 GLTPQ9NZD2 209 aa13.62□□□□□ -0.23
DDX56-210ENST00000479440 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.62□□□□□ -0.23
DDX56-210ENST00000479440 POLR3KQ9Y2Y1 108 aaPredicted RBP13.62□□□□□ -0.23
DDX56-210ENST00000479440 ZNF500O60304 480 aaPredicted RBP13.61□□□□□ -0.23
DDX56-210ENST00000479440 UBOX5O94941 541 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 ALDOCP09972 364 aaKnown RBP13.61□□□□□ -0.23
DDX56-210ENST00000479440 HTR2AP28223 471 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 IL12AP29459 219 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 PRKAR1BP31321 381 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 APLNRP35414 380 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 ZMAT1Q5H9K5 638 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 UNQ6126/PRO20091Q6UXV3 157 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 SLC16A14Q7RTX9 510 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 C10orf53Q8N6V4 93 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 RBM15BQ8NDT2 890 aaKnown RBP13.61□□□□□ -0.23
DDX56-210ENST00000479440 OR6X1Q8NH79 312 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 ZNF566Q969W8 418 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 CCT8L2Q96SF2 557 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 DIRC2Q96SL1 478 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 MMP26Q9NRE1 261 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 CGGBP1Q9UFW8 167 aaPredicted RBP13.61□□□□□ -0.23
DDX56-210ENST00000479440 OR5V1Q9UGF6 321 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 INSIG2Q9Y5U4 225 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 NPTNQ9Y639 398 aa13.61□□□□□ -0.23
DDX56-210ENST00000479440 A8MXK9 166 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 C5orf58C9J3I9 102 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 PLPP3O14495 311 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 TIMM23O14925 209 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 OR6A2O95222 327 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 MT-ATP6P00846 226 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 IL6P05231 212 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 ZCCHC18P0CG32 403 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 PCGF2P35227 344 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 ETV4P43268 484 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 ZNF718Q3SXZ3 478 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 NRN1LQ496H8 165 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 ZNF362Q5T0B9 420 aaPredicted RBP13.6□□□□□ -0.23
DDX56-210ENST00000479440 C16orf87Q6PH81 154 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 BRICD5Q6PL45 260 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 C9orf139Q6ZV77 190 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 PARP8Q8N3A8 854 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 KLHL36Q8N4N3 616 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 OR4K5Q8NGD3 323 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 OR5J2Q8NH18 312 aa13.6□□□□□ -0.23
DDX56-210ENST00000479440 OR4F5Q8NH21 305 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 157.5 ms